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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170229109
CEQG01075069
123265
Gammaproteobacteria
GAG
Leu
>WENV170229511
CEQG01126619
281440
Gammaproteobacteria
TGT
Thr
>WENV170229072
CEQG01071991
183804
Gammaproteobacteria
CAT
Met
>WENV170230045
CEQG01275004
297858
Gammaproteobacteria
TGC
Ala
>WENV170228418
CEQG01009823
178164
Gammaproteobacteria
GAT
Ile
>WENV170229058
CEQG01070823
184446
Gammaproteobacteria
GAC
Val
>WENV170228878
CEQG01049004
299414
Gammaproteobacteria
TTT
Lys
>WENV170229854
CEQG01207826
299414
Gammaproteobacteria
TTT
Lys
>WENV170229057
CEQG01070823
208313
Gammaproteobacteria
GAC
Val
>WENV170229432
CEQG01117911
117772
Gammaproteobacteria
TAG
Leu
>WENV170228843
CEQG01046770
314350
Gammaproteobacteria
CCA
Trp
>WENV170228393
CEQG01006878
281276
Gammaproteobacteria
GGT
Thr
>WENV170229630
CEQG01141009
178469
Gammaproteobacteria
CAT
Met
>WENV170228683
CEQG01031762
180053
Gammaproteobacteria
CAT
Met
>WENV170228427
CEQG01010242
284022
Gammaproteobacteria
TGT
Thr
>WENV170229169
CEQG01081805
29834
Gammaproteobacteria
GCT
Ser
>WENV170228894
CEQG01050350
218635
Gammaproteobacteria
GAC
Val
>WENV170229878
CEQG01222079
179286
Gammaproteobacteria
GGG
Pro
>WENV170228645
CEQG01028387
325309
Gammaproteobacteria
GCC
Gly
>WENV170228392
CEQG01006878
399250
Gammaproteobacteria
TCC
Gly
>WENV170228765
CEQG01038744
73501
Gammaproteobacteria
GAG
Leu
>WENV170228582
CEQG01022937
140925
Gammaproteobacteria
GTA
Tyr
>WENV170228463
CEQG01013210
282550
Gammaproteobacteria
TAC
Val
>WENV170228594
CEQG01023416
329164
Gammaproteobacteria
TTT
Lys
>WENV170228368
CEQG01005481
329164
Gammaproteobacteria
TTT
Lys
>WENV170229061
CEQG01071052
178535
Gammaproteobacteria
CCT
Arg
>WENV170229174
CEQG01082957
176663
Gammaproteobacteria
GGG
Pro
>WENV170229427
CEQG01117559
74339
Gammaproteobacteria
GAG
Leu
>WENV170228490
CEQG01015086
297790
Gammaproteobacteria
TGC
Ala
>WENV170228951
CEQG01056450
292006
Gammaproteobacteria
TGC
Ala
>WENV170228410
CEQG01008669
73498
Gammaproteobacteria
CAA
Leu
>WENV170229405
CEQG01115678
480516
Gammaproteobacteria
GCA
Cys
>WENV170228436
CEQG01011563
480516
Gammaproteobacteria
GCA
Cys
>WENV170229024
CEQG01064997
30633
Gammaproteobacteria
GGA
Ser
>WENV170228527
CEQG01017855
197498
Gammaproteobacteria
TGG
Pro
>WENV170229141
CEQG01078589
280812
Gammaproteobacteria
GAA
Phe
>WENV170228583
CEQG01022937
481325
Gammaproteobacteria
TCC
Gly
>WENV170228576
CEQG01022614
74048
Gammaproteobacteria
CAA
Leu
>WENV170229190
CEQG01084704
481678
Gammaproteobacteria
GCA
Cys
>WENV170228435
CEQG01011563
306288
Gammaproteobacteria
GCC
Gly
>WENV170229583
CEQG01135678
306288
Gammaproteobacteria
GCC
Gly
>WENV170228478
CEQG01014284
117821
Gammaproteobacteria
GTA
Tyr
>WENV170228643
CEQG01028387
491391
Gammaproteobacteria
GCA
Cys
>WENV170228778
CEQG01040122
178550
Gammaproteobacteria
ACG
Arg
>WENV170228779
CEQG01040122
178550
Gammaproteobacteria
ACG
Arg
>WENV170228644
CEQG01028387
73504
Gammaproteobacteria
TAA
Leu
>WENV170228547
CEQG01019091
180680
Gammaproteobacteria
GAC
Val
>WENV170228541
CEQG01018772
180680
Gammaproteobacteria
GAC
Val
>WENV170229237
CEQG01092808
176301
Gammaproteobacteria
GAT
Ile
>WENV170228723
CEQG01034690
180678
Gammaproteobacteria
CCG
Arg
>WENV170228422
CEQG01010020
285547
Gammaproteobacteria
TTG
Gln
>WENV170228777
CEQG01040122
8667
Gammaproteobacteria
GCT
Ser
>WENV170228942
CEQG01054992
315775
Gammaproteobacteria
TGT
Thr
>WENV170228369
CEQG01005717
186591
Gammaproteobacteria
ACG
Arg
>WENV170229426
CEQG01117424
180679
Gammaproteobacteria
CCA
Trp
>WENV170229016
CEQG01064324
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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