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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170230426
CEQH01034453
296698
Alphaproteobacteria
CGC
Ala
>WENV170230859
CEQH01087918
293691
Alphaproteobacteria
GAA
Phe
>WENV170230761
CEQH01073722
178497
Alphaproteobacteria
CCG
Arg
>WENV170230326
CEQH01023796
193463
Alphaproteobacteria
CCT
Arg
>WENV170230091
CEQH01002593
20437
Alphaproteobacteria
GGA
Ser
>WENV170230592
CEQH01051595
201940
Alphaproteobacteria
CAT
Met
>WENV170230334
CEQH01024640
201940
Alphaproteobacteria
CAT
Met
>WENV170231819
CEQH01283897
487436
Alphaproteobacteria
TCC
Gly
>WENV170231666
CEQH01259873
100096
Alphaproteobacteria
TAA
Leu
>WENV170231138
CEQH01126467
403836
Alphaproteobacteria
>WENV170230912
CEQH01095991
399340
Alphaproteobacteria
GTT
Asn
>WENV170230315
CEQH01023058
178734
Alphaproteobacteria
TGG
Pro
>WENV170230414
CEQH01033459
181950
Alphaproteobacteria
TCT
Arg
>WENV170230744
CEQH01072375
121250
Alphaproteobacteria
TAG
Leu
>WENV170230314
CEQH01023058
178733
Alphaproteobacteria
CAT
Met
>WENV170230442
CEQH01036393
427571
Alphaproteobacteria
GCC
Gly
>WENV170230285
CEQH01019962
427571
Alphaproteobacteria
GCC
Gly
>WENV170230584
CEQH01051074
400211
Alphaproteobacteria
>WENV170230585
CEQH01051074
400211
Alphaproteobacteria
>WENV170230700
CEQH01065889
73986
Alphaproteobacteria
CAG
Leu
>WENV170231016
CEQH01110293
280860
Alphaproteobacteria
TAC
Val
>WENV170231707
CEQH01267721
73167
Alphaproteobacteria
GAG
Leu
>WENV170230135
CEQH01006409
117819
Alphaproteobacteria
TAG
Leu
>WENV170230572
CEQH01049860
29610
Alphaproteobacteria
TGA
Ser
>WENV170231280
CEQH01142016
192275
Alphaproteobacteria
GTG
His
>WENV170231312
CEQH01146789
400517
Alphaproteobacteria
GGT
Thr
>WENV170231197
CEQH01133082
481098
Alphaproteobacteria
CTG
Gln
>WENV170231639
CEQH01249588
13331
Alphaproteobacteria
GCT
Ser
>WENV170230939
CEQH01099027
233665
Alphaproteobacteria
CCT
Arg
>WENV170230979
CEQH01104744
233665
Alphaproteobacteria
CCT
Arg
>WENV170230410
CEQH01033257
345907
Alphaproteobacteria
CGT
Thr
>WENV170230600
CEQH01052366
400106
Alphaproteobacteria
GTT
Asn
>WENV170230682
CEQH01063163
228484
Alphaproteobacteria
CCG
Arg
>WENV170231653
CEQH01255019
296763
Alphaproteobacteria
CCA
Trp
>WENV170230617
CEQH01054514
481099
Alphaproteobacteria
TCC
Gly
>WENV170230475
CEQH01039636
481099
Alphaproteobacteria
TCC
Gly
>WENV170230960
CEQH01102229
480900
Alphaproteobacteria
GCA
Cys
>WENV170231208
CEQH01134896
29739
Alphaproteobacteria
CGA
Ser
>WENV170231625
CEQH01244700
29739
Alphaproteobacteria
CGA
Ser
>WENV170231297
CEQH01144213
84860
Alphaproteobacteria
CAG
Leu
>WENV170230223
CEQH01013837
305449
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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