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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170230593
CEQH01051686
297858
Gammaproteobacteria
TGC
Ala
>WENV170230078
CEQH01001579
178164
Gammaproteobacteria
GAT
Ile
>WENV170230463
CEQH01038789
178164
Gammaproteobacteria
GAT
Ile
>WENV170231128
CEQH01124662
118218
Gammaproteobacteria
TAG
Leu
>WENV170231287
CEQH01143239
341033
Gammaproteobacteria
GTT
Asn
>WENV170230394
CEQH01031209
180053
Gammaproteobacteria
CAT
Met
>WENV170231072
CEQH01118002
20618
Gammaproteobacteria
GGA
Ser
>WENV170231048
CEQH01115397
73501
Gammaproteobacteria
GAG
Leu
>WENV170231144
CEQH01127097
176868
Gammaproteobacteria
CAT
Met
>WENV170230153
CEQH01008505
282550
Gammaproteobacteria
TAC
Val
>WENV170230122
CEQH01005381
329164
Gammaproteobacteria
TTT
Lys
>WENV170231684
CEQH01263533
178535
Gammaproteobacteria
CCT
Arg
>WENV170231345
CEQH01149406
13452
Gammaproteobacteria
GCT
Ser
>WENV170231042
CEQH01114590
74339
Gammaproteobacteria
GAG
Leu
>WENV170230610
CEQH01053616
351236
Gammaproteobacteria
TTT
Lys
>WENV170231156
CEQH01128339
178540
Gammaproteobacteria
TGG
Pro
>WENV170230819
CEQH01081587
292006
Gammaproteobacteria
TGC
Ala
>WENV170231629
CEQH01246319
73498
Gammaproteobacteria
CAA
Leu
>WENV170231425
CEQH01159381
178168
Gammaproteobacteria
ACG
Arg
>WENV170230261
CEQH01017041
480516
Gammaproteobacteria
GCA
Cys
>WENV170230206
CEQH01012573
480516
Gammaproteobacteria
GCA
Cys
>WENV170231615
CEQH01241884
30633
Gammaproteobacteria
GGA
Ser
>WENV170231175
CEQH01130483
443066
Gammaproteobacteria
GGT
Thr
>WENV170230173
CEQH01009972
197498
Gammaproteobacteria
TGG
Pro
>WENV170231422
CEQH01158621
56340
Gammaproteobacteria
GGA
Ser
>WENV170231285
CEQH01142835
307269
Gammaproteobacteria
TTC
Glu
>WENV170230109
CEQH01004353
401684
Gammaproteobacteria
CCT
Arg
>WENV170231758
CEQH01275377
195541
Gammaproteobacteria
TGG
Pro
>WENV170230117
CEQH01004853
306288
Gammaproteobacteria
GCC
Gly
>WENV170230566
CEQH01049033
306288
Gammaproteobacteria
GCC
Gly
>WENV170231153
CEQH01128184
306288
Gammaproteobacteria
GCC
Gly
>WENV170230282
CEQH01019468
346373
Gammaproteobacteria
GAA
Phe
>WENV170231227
CEQH01136622
370389
Gammaproteobacteria
GGC
Ala
>WENV170230501
CEQH01042558
180680
Gammaproteobacteria
GAC
Val
>WENV170230946
CEQH01099455
176301
Gammaproteobacteria
GAT
Ile
>WENV170230549
CEQH01047802
342263
Gammaproteobacteria
TTT
Lys
>WENV170230613
CEQH01053800
315775
Gammaproteobacteria
TGT
Thr
>WENV170230611
CEQH01053799
315775
Gammaproteobacteria
TGT
Thr
>WENV170230536
CEQH01047251
281283
Gammaproteobacteria
GTG
His
>WENV170231633
CEQH01247885
118205
Gammaproteobacteria
GTA
Tyr
>WENV170230347
CEQH01026422
176478
Gammaproteobacteria
CAT
Met
>WENV170231675
CEQH01262111
141076
Gammaproteobacteria
GTA
Tyr
>WENV170230770
CEQH01074773
342077
Gammaproteobacteria
TAC
Val
>WENV170230233
CEQH01014795
186591
Gammaproteobacteria
ACG
Arg
>WENV170230232
CEQH01014795
186591
Gammaproteobacteria
ACG
Arg
>WENV170230191
CEQH01010915
186591
Gammaproteobacteria
ACG
Arg
>WENV170231096
CEQH01120754
179613
Gammaproteobacteria
CAT
Met
>WENV170231641
CEQH01250812
282902
Gammaproteobacteria
TGT
Thr
>WENV170231310
CEQH01146425
178533
Gammaproteobacteria
GGG
Pro
>WENV170230855
CEQH01087357
180679
Gammaproteobacteria
CCA
Trp
>WENV170230063
CEQH01000433
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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