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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170236010
CEQL01142006
179894
Alphaproteobacteria
CCG
Arg
>WENV170236250
CEQL01183261
178050
Alphaproteobacteria
GTG
His
>WENV170236324
CEQL01228949
284697
Alphaproteobacteria
GAA
Phe
>WENV170236528
CEQL01327792
403836
Alphaproteobacteria
>WENV170235398
CEQL01077691
399340
Alphaproteobacteria
GTT
Asn
>WENV170235272
CEQL01062530
231487
Alphaproteobacteria
TCT
Arg
>WENV170236401
CEQL01280851
284698
Alphaproteobacteria
TTT
Lys
>WENV170236481
CEQL01311722
32168
Alphaproteobacteria
CGA
Ser
>WENV170236249
CEQL01183199
13331
Alphaproteobacteria
GCT
Ser
>WENV170234870
CEQL01019121
178237
Alphaproteobacteria
CAT
Met
>WENV170235985
CEQL01139592
366050
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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