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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170248547
CEQQ01139265
281440
Gammaproteobacteria
TGT
Thr
>WENV170246923
CEQQ01004918
422716
Gammaproteobacteria
TTG
Gln
>WENV170248730
CEQQ01185064
20618
Gammaproteobacteria
GGA
Ser
>WENV170247791
CEQQ01066322
120827
Gammaproteobacteria
GAG
Leu
>WENV170247496
CEQQ01042437
292194
Gammaproteobacteria
GGT
Thr
>WENV170246874
CEQQ01002704
329164
Gammaproteobacteria
TTT
Lys
>WENV170247191
CEQQ01021827
74339
Gammaproteobacteria
GAG
Leu
>WENV170248166
CEQQ01101797
480516
Gammaproteobacteria
GCA
Cys
>WENV170248839
CEQQ01224877
184459
Gammaproteobacteria
CAT
Met
>WENV170247950
CEQQ01081326
176545
Gammaproteobacteria
CAT
Met
>WENV170246919
CEQQ01004675
118413
Gammaproteobacteria
TAG
Leu
>WENV170248557
CEQQ01140402
74048
Gammaproteobacteria
CAA
Leu
>WENV170248033
CEQQ01089082
306288
Gammaproteobacteria
GCC
Gly
>WENV170248104
CEQQ01095204
180680
Gammaproteobacteria
GAC
Val
>WENV170247944
CEQQ01080871
180680
Gammaproteobacteria
GAC
Val
>WENV170246869
CEQQ01002258
180680
Gammaproteobacteria
GAC
Val
>WENV170247522
CEQQ01044065
180678
Gammaproteobacteria
CCG
Arg
>WENV170248847
CEQQ01226015
481314
Gammaproteobacteria
GCA
Cys
>WENV170247016
CEQQ01010170
186591
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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