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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170248925
CEQR01001722
318157
Gammaproteobacteria
GTT
Asn
>WENV170249224
CEQR01110718
118218
Gammaproteobacteria
TAG
Leu
>WENV170249236
CEQR01110940
178175
Gammaproteobacteria
ACG
Arg
>WENV170248928
CEQR01002077
73501
Gammaproteobacteria
GAG
Leu
>WENV170249229
CEQR01110853
197551
Gammaproteobacteria
TCT
Arg
>WENV170248944
CEQR01006210
178535
Gammaproteobacteria
CCT
Arg
>WENV170248931
CEQR01002160
74339
Gammaproteobacteria
GAG
Leu
>WENV170249216
CEQR01110492
20410
Gammaproteobacteria
TGA
Ser
>WENV170248940
CEQR01004519
292006
Gammaproteobacteria
TGC
Ala
>WENV170248941
CEQR01004767
73498
Gammaproteobacteria
CAA
Leu
>WENV170248933
CEQR01002641
178541
Gammaproteobacteria
CGG
Pro
>WENV170248935
CEQR01002707
56340
Gammaproteobacteria
GGA
Ser
>WENV170248926
CEQR01001782
282922
Gammaproteobacteria
GAA
Phe
>WENV170249233
CEQR01110930
370389
Gammaproteobacteria
GGC
Ala
>WENV170248924
CEQR01001722
371341
Gammaproteobacteria
GTT
Asn
>WENV170249042
CEQR01062104
201377
Gammaproteobacteria
TGG
Pro
>WENV170248919
CEQR01000829
401830
Gammaproteobacteria
TTG
Gln
>WENV170248937
CEQR01004098
178533
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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