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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170255527
CEQX01002892
308123
Alphaproteobacteria
CCA
Trp
>WENV170255599
CEQX01008028
193373
Alphaproteobacteria
CGG
Pro
>WENV170255728
CEQX01017792
178734
Alphaproteobacteria
TGG
Pro
>WENV170255769
CEQX01021248
296698
Alphaproteobacteria
CGC
Ala
>WENV170255814
CEQX01026092
140876
Alphaproteobacteria
>WENV170256118
CEQX01052965
432650
Alphaproteobacteria
GAA
Phe
>WENV170256220
CEQX01061908
488318
Alphaproteobacteria
TCC
Gly
>WENV170256228
CEQX01063194
399000
Alphaproteobacteria
TTC
Glu
>WENV170256408
CEQX01085313
140893
Alphaproteobacteria
CAA
Leu
>WENV170256427
CEQX01087549
118213
Alphaproteobacteria
TAG
Leu
>WENV170256492
CEQX01094699
281676
Alphaproteobacteria
TAC
Val
>WENV170256672
CEQX01116536
178503
Alphaproteobacteria
GGG
Pro
>WENV170256698
CEQX01118754
400514
Alphaproteobacteria
TTG
Gln
>WENV170256717
CEQX01120960
400387
Alphaproteobacteria
GGT
Thr
>WENV170256799
CEQX01131958
100185
Alphaproteobacteria
GAG
Leu
>WENV170256808
CEQX01133224
398994
Alphaproteobacteria
GTT
Asn
>WENV170256833
CEQX01136785
180029
Alphaproteobacteria
CAT
Met
>WENV170256887
CEQX01140690
201940
Alphaproteobacteria
CAT
Met
>WENV170256931
CEQX01143963
121250
Alphaproteobacteria
TAG
Leu
>WENV170256958
CEQX01145770
73523
Alphaproteobacteria
CAG
Leu
>WENV170257011
CEQX01149394
192275
Alphaproteobacteria
GTG
His
>WENV170257056
CEQX01152718
178731
Alphaproteobacteria
GTC
Asp
>WENV170257260
CEQX01217354
481096
Alphaproteobacteria
CCC
Gly
>WENV170257291
CEQX01236005
282748
Alphaproteobacteria
CGT
Thr
>WENV170257334
CEQX01259834
400516
Alphaproteobacteria
TTG
Gln
>WENV170257447
CEQX01314864
400518
Alphaproteobacteria
GAA
Phe
>WENV170257495
CEQX01332012
299458
Alphaproteobacteria
TTT
Lys
>WENV170257568
CEQX01347995
282981
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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