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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170257877
CEQY01020285
158246
Gammaproteobacteria
GTC
Asp
>WENV170260111
CEQY01393344
176064
Gammaproteobacteria
CAT
Met
>WENV170258585
CEQY01084215
180053
Gammaproteobacteria
CAT
Met
>WENV170258656
CEQY01093025
140925
Gammaproteobacteria
GTA
Tyr
>WENV170259307
CEQY01167405
282550
Gammaproteobacteria
TAC
Val
>WENV170258521
CEQY01075633
176169
Gammaproteobacteria
>WENV170259926
CEQY01311415
178471
Gammaproteobacteria
GTT
Asn
>WENV170259983
CEQY01343212
480516
Gammaproteobacteria
GCA
Cys
>WENV170257714
CEQY01004823
291402
Gammaproteobacteria
GTG
His
>WENV170258657
CEQY01093025
481325
Gammaproteobacteria
TCC
Gly
>WENV170259592
CEQY01194857
56374
Gammaproteobacteria
TGA
Ser
>WENV170259629
CEQY01196934
334421
Gammaproteobacteria
TGT
Thr
>WENV170257768
CEQY01011075
317792
Gammaproteobacteria
TGC
Ala
>WENV170258655
CEQY01093025
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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