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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260255
CEQZ01004136
190614
Alphaproteobacteria
TGG
Pro
>WENV170260515
CEQZ01055685
178510
Alphaproteobacteria
ACG
Arg
>WENV170260313
CEQZ01010920
446430
Alphaproteobacteria
CAC
Val
>WENV170260352
CEQZ01016143
400848
Alphaproteobacteria
GAC
Val
>WENV170260321
CEQZ01012282
299509
Alphaproteobacteria
GTT
Asn
>WENV170260437
CEQZ01038106
73374
Alphaproteobacteria
CAG
Leu
>WENV170260342
CEQZ01014665
140876
Alphaproteobacteria
>WENV170260314
CEQZ01010946
400387
Alphaproteobacteria
GGT
Thr
>WENV170260401
CEQZ01020338
400518
Alphaproteobacteria
GAA
Phe
>WENV170260329
CEQZ01013036
178731
Alphaproteobacteria
GTC
Asp
>WENV170260366
CEQZ01017154
88908
Alphaproteobacteria
GAG
Leu
>WENV170260211
CEQZ01001411
78115
Alphaproteobacteria
GAG
Leu
>WENV170260344
CEQZ01014838
78115
Alphaproteobacteria
GAG
Leu
>WENV170260418
CEQZ01027838
178734
Alphaproteobacteria
TGG
Pro
>WENV170260335
CEQZ01013626
180029
Alphaproteobacteria
CAT
Met
>WENV170260417
CEQZ01027838
178733
Alphaproteobacteria
CAT
Met
>WENV170260270
CEQZ01005685
179941
Alphaproteobacteria
CAT
Met
>WENV170260302
CEQZ01008890
29729
Alphaproteobacteria
GCT
Ser
>WENV170260245
CEQZ01003094
29729
Alphaproteobacteria
GCT
Ser
>WENV170260194
CEQZ01000543
195451
Alphaproteobacteria
GAC
Val
>WENV170260519
CEQZ01055965
482561
Alphaproteobacteria
TCC
Gly
>WENV170260456
CEQZ01046137
400517
Alphaproteobacteria
GGT
Thr
>WENV170260244
CEQZ01003039
281650
Alphaproteobacteria
CCA
Trp
>WENV170260479
CEQZ01051218
118213
Alphaproteobacteria
TAG
Leu
>WENV170260375
CEQZ01017978
233665
Alphaproteobacteria
CCT
Arg
>WENV170260412
CEQZ01025235
282981
Alphaproteobacteria
CCA
Trp
>WENV170260498
CEQZ01053598
353624
Alphaproteobacteria
CCA
Trp
>WENV170260320
CEQZ01012197
283255
Alphaproteobacteria
GGC
Ala
>WENV170260361
CEQZ01016839
398996
Alphaproteobacteria
GCC
Gly
>WENV170260430
CEQZ01033245
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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