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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260978
CERB01029824
284706
Gammaproteobacteria
GTT
Asn
>WENV170261773
CERB01109381
158246
Gammaproteobacteria
GTC
Asp
>WENV170260940
CERB01024534
284022
Gammaproteobacteria
TGT
Thr
>WENV170260772
CERB01008842
292194
Gammaproteobacteria
GGT
Thr
>WENV170262062
CERB01143760
292006
Gammaproteobacteria
TGC
Ala
>WENV170260886
CERB01019650
401684
Gammaproteobacteria
CCT
Arg
>WENV170261169
CERB01044847
208229
Gammaproteobacteria
TGG
Pro
>WENV170261739
CERB01106272
74048
Gammaproteobacteria
CAA
Leu
>WENV170261075
CERB01037919
177028
Gammaproteobacteria
CAT
Met
>WENV170261066
CERB01036970
177028
Gammaproteobacteria
CAT
Met
>WENV170261675
CERB01098904
488965
Gammaproteobacteria
GCA
Cys
>WENV170261702
CERB01102025
180680
Gammaproteobacteria
GAC
Val
>WENV170261568
CERB01089078
180680
Gammaproteobacteria
GAC
Val
>WENV170261394
CERB01069405
176301
Gammaproteobacteria
GAT
Ile
>WENV170260766
CERB01007923
176301
Gammaproteobacteria
GAT
Ile
>WENV170262801
CERB01340820
180678
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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