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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170263321
CERC01035197
289658
Gammaproteobacteria
CGT
Thr
>WENV170263365
CERC01039958
183804
Gammaproteobacteria
CAT
Met
>WENV170263464
CERC01050458
209464
Gammaproteobacteria
CCG
Arg
>WENV170263593
CERC01060460
73116
Gammaproteobacteria
CAA
Leu
>WENV170262992
CERC01010244
284132
Gammaproteobacteria
TTT
Lys
>WENV170262976
CERC01008641
184446
Gammaproteobacteria
GAC
Val
>WENV170263144
CERC01020877
184446
Gammaproteobacteria
GAC
Val
>WENV170263210
CERC01026653
307138
Gammaproteobacteria
TGT
Thr
>WENV170262876
CERC01002431
422716
Gammaproteobacteria
TTG
Gln
>WENV170262975
CERC01008641
208313
Gammaproteobacteria
GAC
Val
>WENV170263005
CERC01011597
314350
Gammaproteobacteria
CCA
Trp
>WENV170262880
CERC01002809
179283
Gammaproteobacteria
ACG
Arg
>WENV170262881
CERC01002809
179283
Gammaproteobacteria
ACG
Arg
>WENV170262882
CERC01002809
179283
Gammaproteobacteria
ACG
Arg
>WENV170262869
CERC01002102
178469
Gammaproteobacteria
CAT
Met
>WENV170263371
CERC01040185
178469
Gammaproteobacteria
CAT
Met
>WENV170263442
CERC01047904
74826
Gammaproteobacteria
TAA
Leu
>WENV170262988
CERC01009916
284022
Gammaproteobacteria
TGT
Thr
>WENV170263041
CERC01014274
179286
Gammaproteobacteria
GGG
Pro
>WENV170263644
CERC01064393
179286
Gammaproteobacteria
GGG
Pro
>WENV170263213
CERC01027006
304066
Gammaproteobacteria
TTT
Lys
>WENV170263230
CERC01028458
287057
Gammaproteobacteria
GAA
Phe
>WENV170262888
CERC01003035
20407
Gammaproteobacteria
TGA
Ser
>WENV170263070
CERC01016406
283222
Gammaproteobacteria
GTG
His
>WENV170263652
CERC01064683
178025
Gammaproteobacteria
GAC
Val
>WENV170262852
CERC01001100
284693
Gammaproteobacteria
TTC
Glu
>WENV170262929
CERC01005488
325309
Gammaproteobacteria
GCC
Gly
>WENV170262928
CERC01005488
325309
Gammaproteobacteria
GCC
Gly
>WENV170263207
CERC01026439
140925
Gammaproteobacteria
GTA
Tyr
>WENV170262973
CERC01008597
74339
Gammaproteobacteria
GAG
Leu
>WENV170263605
CERC01062027
299227
Gammaproteobacteria
GTT
Asn
>WENV170263755
CERC01073599
283966
Gammaproteobacteria
CCT
Arg
>WENV170262892
CERC01003358
20487
Gammaproteobacteria
TGA
Ser
>WENV170263607
CERC01062159
20487
Gammaproteobacteria
TGA
Ser
>WENV170263115
CERC01018370
210406
Gammaproteobacteria
ACG
Arg
>WENV170263116
CERC01018370
210406
Gammaproteobacteria
ACG
Arg
>WENV170263846
CERC01099117
181513
Gammaproteobacteria
TGG
Pro
>WENV170263242
CERC01029406
184459
Gammaproteobacteria
CAT
Met
>WENV170263642
CERC01064008
30633
Gammaproteobacteria
GGA
Ser
>WENV170263738
CERC01068257
56694
Gammaproteobacteria
GGA
Ser
>WENV170262997
CERC01010855
178466
Gammaproteobacteria
CCA
Trp
>WENV170263134
CERC01019947
178466
Gammaproteobacteria
CCA
Trp
>WENV170263161
CERC01022731
178466
Gammaproteobacteria
CCA
Trp
>WENV170263208
CERC01026439
481325
Gammaproteobacteria
TCC
Gly
>WENV170262945
CERC01006544
118413
Gammaproteobacteria
TAG
Leu
>WENV170263221
CERC01027763
30632
Gammaproteobacteria
TGA
Ser
>WENV170262989
CERC01010104
401684
Gammaproteobacteria
CCT
Arg
>WENV170263569
CERC01058702
178169
Gammaproteobacteria
GAC
Val
>WENV170263414
CERC01044647
178169
Gammaproteobacteria
GAC
Val
>WENV170263350
CERC01037795
283226
Gammaproteobacteria
TAC
Val
>WENV170262844
CERC01000858
74048
Gammaproteobacteria
CAA
Leu
>WENV170263331
CERC01036150
481678
Gammaproteobacteria
GCA
Cys
>WENV170263445
CERC01048554
178467
Gammaproteobacteria
GGG
Pro
>WENV170262840
CERC01000532
306288
Gammaproteobacteria
GCC
Gly
>WENV170263378
CERC01041139
306288
Gammaproteobacteria
GCC
Gly
>WENV170263206
CERC01026398
117821
Gammaproteobacteria
GTA
Tyr
>WENV170263330
CERC01036150
319139
Gammaproteobacteria
GCC
Gly
>WENV170262993
CERC01010244
29695
Gammaproteobacteria
GGA
Ser
>WENV170262937
CERC01006253
178550
Gammaproteobacteria
ACG
Arg
>WENV170262874
CERC01002410
317792
Gammaproteobacteria
TGC
Ala
>WENV170262932
CERC01005773
317792
Gammaproteobacteria
TGC
Ala
>WENV170263535
CERC01056290
317792
Gammaproteobacteria
TGC
Ala
>WENV170263248
CERC01029837
56623
Gammaproteobacteria
GGA
Ser
>WENV170262980
CERC01009146
180678
Gammaproteobacteria
CCG
Arg
>WENV170262841
CERC01000532
490297
Gammaproteobacteria
GCA
Cys
>WENV170263665
CERC01065348
400372
Gammaproteobacteria
CCT
Arg
>WENV170263399
CERC01043212
201377
Gammaproteobacteria
TGG
Pro
>WENV170262934
CERC01005984
8635
Gammaproteobacteria
GCT
Ser
>WENV170263183
CERC01024297
141076
Gammaproteobacteria
GTA
Tyr
>WENV170263240
CERC01029334
186591
Gammaproteobacteria
ACG
Arg
>WENV170263996
CERC01132374
179613
Gammaproteobacteria
CAT
Met
>WENV170263034
CERC01013646
282902
Gammaproteobacteria
TGT
Thr
>WENV170262891
CERC01003216
118341
Gammaproteobacteria
CAA
Leu
>WENV170263130
CERC01019694
286691
Gammaproteobacteria
GTG
His
>WENV170262966
CERC01007978
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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