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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170267175
CERF01017951
73123
Gammaproteobacteria
CAA
Leu
>WENV170267201
CERF01026023
281275
Gammaproteobacteria
TGT
Thr
>WENV170267256
CERF01036421
20273
Gammaproteobacteria
TGA
Ser
>WENV170267154
CERF01013627
176662
Gammaproteobacteria
ACG
Arg
>WENV170267153
CERF01013627
29834
Gammaproteobacteria
GCT
Ser
>WENV170267203
CERF01026023
399250
Gammaproteobacteria
TCC
Gly
>WENV170267112
CERF01005915
140925
Gammaproteobacteria
GTA
Tyr
>WENV170267345
CERF01075433
282550
Gammaproteobacteria
TAC
Val
>WENV170267147
CERF01011330
74339
Gammaproteobacteria
GAG
Leu
>WENV170267250
CERF01035005
480516
Gammaproteobacteria
GCA
Cys
>WENV170267202
CERF01026023
126555
Gammaproteobacteria
GTA
Tyr
>WENV170267249
CERF01035005
306288
Gammaproteobacteria
GCC
Gly
>WENV170267191
CERF01022249
370389
Gammaproteobacteria
GGC
Ala
>WENV170267165
CERF01014791
176665
Gammaproteobacteria
CGG
Pro
>WENV170267204
CERF01026023
296808
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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