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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170271404
CERJ01011946
201994
Gammaproteobacteria
TCT
Arg
>WENV170271576
CERJ01051508
487002
Gammaproteobacteria
GCA
Cys
>WENV170271406
CERJ01012201
281275
Gammaproteobacteria
TGT
Thr
>WENV170271626
CERJ01069547
118218
Gammaproteobacteria
TAG
Leu
>WENV170271383
CERJ01007426
180053
Gammaproteobacteria
CAT
Met
>WENV170271497
CERJ01021614
401696
Gammaproteobacteria
TTG
Gln
>WENV170271341
CERJ01002820
29399
Gammaproteobacteria
GGA
Ser
>WENV170271323
CERJ01000417
284693
Gammaproteobacteria
TTC
Glu
>WENV170271544
CERJ01032784
197551
Gammaproteobacteria
TCT
Arg
>WENV170271423
CERJ01014521
74339
Gammaproteobacteria
GAG
Leu
>WENV170271465
CERJ01019080
480516
Gammaproteobacteria
GCA
Cys
>WENV170271684
CERJ01077114
118413
Gammaproteobacteria
TAG
Leu
>WENV170271545
CERJ01033265
178549
Gammaproteobacteria
GTT
Asn
>WENV170271536
CERJ01028622
178532
Gammaproteobacteria
CCG
Arg
>WENV170271559
CERJ01042422
176665
Gammaproteobacteria
CGG
Pro
>WENV170271613
CERJ01066288
481314
Gammaproteobacteria
GCA
Cys
>WENV170271604
CERJ01065222
281283
Gammaproteobacteria
GTG
His
>WENV170271370
CERJ01005433
186591
Gammaproteobacteria
ACG
Arg
>WENV170271371
CERJ01005433
186591
Gammaproteobacteria
ACG
Arg
>WENV170271372
CERJ01005433
186591
Gammaproteobacteria
ACG
Arg
>WENV170271540
CERJ01030843
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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