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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170271758
CERK01005226
400818
Bacteroidota
TTC
Glu
>WENV170271875
CERK01014745
400818
Bacteroidota
TTC
Glu
>WENV170272320
CERK01066111
400818
Bacteroidota
TTC
Glu
>WENV170271933
CERK01020905
364431
Bacteroidota
TCC
Gly
>WENV170271746
CERK01003815
209351
Bacteroidota
CAT
Met
>WENV170271905
CERK01018286
155808
Bacteroidota
TGG
Pro
>WENV170272142
CERK01045470
155808
Bacteroidota
TGG
Pro
>WENV170271996
CERK01027221
121312
Bacteroidota
TAG
Leu
>WENV170272351
CERK01069159
227539
Bacteroidota
GTT
Asn
>WENV170272126
CERK01042666
235895
Bacteroidota
GTT
Asn
>WENV170271693
CERK01000241
235895
Bacteroidota
GTT
Asn
>WENV170272154
CERK01046463
299065
Bacteroidota
TTG
Gln
>WENV170271916
CERK01019099
193718
Bacteroidota
GTC
Asp
>WENV170272546
CERK01130491
186849
Bacteroidota
TCT
Arg
>WENV170271796
CERK01007887
372845
Bacteroidota
CCA
Trp
>WENV170271774
CERK01005936
24958
Bacteroidota
GGA
Ser
>WENV170272541
CERK01128969
156340
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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