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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170272982
CERL01037613
331330
Gammaproteobacteria
TAC
Val
>WENV170273149
CERL01053916
123265
Gammaproteobacteria
GAG
Leu
>WENV170272961
CERL01035732
297858
Gammaproteobacteria
TGC
Ala
>WENV170273472
CERL01092558
209464
Gammaproteobacteria
CCG
Arg
>WENV170272768
CERL01014943
318157
Gammaproteobacteria
GTT
Asn
>WENV170273139
CERL01052578
184446
Gammaproteobacteria
GAC
Val
>WENV170273956
CERL01204951
184446
Gammaproteobacteria
GAC
Val
>WENV170273138
CERL01052578
208313
Gammaproteobacteria
GAC
Val
>WENV170273528
CERL01099018
118218
Gammaproteobacteria
TAG
Leu
>WENV170273173
CERL01056293
179283
Gammaproteobacteria
ACG
Arg
>WENV170273174
CERL01056293
179283
Gammaproteobacteria
ACG
Arg
>WENV170273175
CERL01056293
179283
Gammaproteobacteria
ACG
Arg
>WENV170272758
CERL01014007
178469
Gammaproteobacteria
CAT
Met
>WENV170273485
CERL01094257
180053
Gammaproteobacteria
CAT
Met
>WENV170273029
CERL01041732
353123
Gammaproteobacteria
CCA
Trp
>WENV170273078
CERL01046361
185999
Gammaproteobacteria
CCG
Arg
>WENV170273480
CERL01093328
73501
Gammaproteobacteria
GAG
Leu
>WENV170273443
CERL01088755
220813
Gammaproteobacteria
CCG
Arg
>WENV170273155
CERL01055206
140925
Gammaproteobacteria
GTA
Tyr
>WENV170273367
CERL01079276
30550
Gammaproteobacteria
GGA
Ser
>WENV170272670
CERL01006686
282550
Gammaproteobacteria
TAC
Val
>WENV170272822
CERL01020781
313852
Gammaproteobacteria
TTC
Glu
>WENV170273550
CERL01101318
299227
Gammaproteobacteria
GTT
Asn
>WENV170273118
CERL01050607
351236
Gammaproteobacteria
TTT
Lys
>WENV170273119
CERL01050607
351236
Gammaproteobacteria
TTT
Lys
>WENV170273595
CERL01105009
292006
Gammaproteobacteria
TGC
Ala
>WENV170272686
CERL01007600
20487
Gammaproteobacteria
TGA
Ser
>WENV170273258
CERL01065481
480516
Gammaproteobacteria
GCA
Cys
>WENV170272680
CERL01007316
197498
Gammaproteobacteria
TGG
Pro
>WENV170273156
CERL01055206
481325
Gammaproteobacteria
TCC
Gly
>WENV170272715
CERL01009974
118413
Gammaproteobacteria
TAG
Leu
>WENV170273358
CERL01078403
178169
Gammaproteobacteria
GAC
Val
>WENV170272688
CERL01007604
232119
Gammaproteobacteria
ACG
Arg
>WENV170273820
CERL01162357
178467
Gammaproteobacteria
GGG
Pro
>WENV170273702
CERL01117738
306288
Gammaproteobacteria
GCC
Gly
>WENV170272641
CERL01003847
334421
Gammaproteobacteria
TGT
Thr
>WENV170273314
CERL01072237
178532
Gammaproteobacteria
CCG
Arg
>WENV170272708
CERL01009395
317792
Gammaproteobacteria
TGC
Ala
>WENV170273475
CERL01092558
296672
Gammaproteobacteria
GGT
Thr
>WENV170272904
CERL01029276
180678
Gammaproteobacteria
CCG
Arg
>WENV170272710
CERL01009454
180678
Gammaproteobacteria
CCG
Arg
>WENV170272687
CERL01007600
8605
Gammaproteobacteria
>WENV170272900
CERL01028838
400372
Gammaproteobacteria
CCT
Arg
>WENV170272869
CERL01025710
349758
Gammaproteobacteria
GGC
Ala
>WENV170273247
CERL01064297
349758
Gammaproteobacteria
GGC
Ala
>WENV170272712
CERL01009558
8635
Gammaproteobacteria
GCT
Ser
>WENV170273473
CERL01092558
141076
Gammaproteobacteria
GTA
Tyr
>WENV170273154
CERL01055206
282902
Gammaproteobacteria
TGT
Thr
>WENV170272726
CERL01010947
180679
Gammaproteobacteria
CCA
Trp
>WENV170273362
CERL01078403
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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