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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170274179
CERM01003041
481268
Alphaproteobacteria
TCC
Gly
>WENV170274224
CERM01005349
400384
Alphaproteobacteria
TTC
Glu
>WENV170274225
CERM01005416
408543
Alphaproteobacteria
GAC
Val
>WENV170274236
CERM01005685
178784
Alphaproteobacteria
CAT
Met
>WENV170274398
CERM01014474
179390
Alphaproteobacteria
TGG
Pro
>WENV170274402
CERM01014770
481268
Alphaproteobacteria
TCC
Gly
>WENV170274530
CERM01022747
140893
Alphaproteobacteria
CAA
Leu
>WENV170274623
CERM01030242
481268
Alphaproteobacteria
TCC
Gly
>WENV170274659
CERM01032963
178510
Alphaproteobacteria
ACG
Arg
>WENV170274690
CERM01035457
212319
Alphaproteobacteria
GTG
His
>WENV170274751
CERM01039310
179941
Alphaproteobacteria
CAT
Met
>WENV170274849
CERM01046413
229285
Alphaproteobacteria
GGG
Pro
>WENV170274870
CERM01047482
201940
Alphaproteobacteria
CAT
Met
>WENV170274917
CERM01051787
281676
Alphaproteobacteria
TAC
Val
>WENV170275106
CERM01065770
193088
Alphaproteobacteria
GAT
Ile
>WENV170275115
CERM01066263
197241
Alphaproteobacteria
GGG
Pro
>WENV170275171
CERM01070414
408543
Alphaproteobacteria
GAC
Val
>WENV170275365
CERM01080904
408543
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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