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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170276731
CERO01016815
299458
Alphaproteobacteria
TTT
Lys
>WENV170276946
CERO01079586
20437
Alphaproteobacteria
GGA
Ser
>WENV170276673
CERO01007731
178731
Alphaproteobacteria
GTC
Asp
>WENV170276938
CERO01077940
400516
Alphaproteobacteria
TTG
Gln
>WENV170276682
CERO01008727
400384
Alphaproteobacteria
TTC
Glu
>WENV170276863
CERO01039663
400514
Alphaproteobacteria
TTG
Gln
>WENV170276892
CERO01056157
121250
Alphaproteobacteria
TAG
Leu
>WENV170276748
CERO01019603
398999
Alphaproteobacteria
GGT
Thr
>WENV170276589
CERO01000119
178503
Alphaproteobacteria
GGG
Pro
>WENV170276704
CERO01012345
399000
Alphaproteobacteria
TTC
Glu
>WENV170276798
CERO01031736
399000
Alphaproteobacteria
TTC
Glu
>WENV170276911
CERO01069396
481096
Alphaproteobacteria
CCC
Gly
>WENV170276932
CERO01076603
345907
Alphaproteobacteria
CGT
Thr
>WENV170276903
CERO01062358
282981
Alphaproteobacteria
CCA
Trp
>WENV170276812
CERO01033300
228484
Alphaproteobacteria
CCG
Arg
>WENV170276813
CERO01033491
179724
Alphaproteobacteria
ACG
Arg
>WENV170276750
CERO01020279
398996
Alphaproteobacteria
GCC
Gly
>WENV170276625
CERO01002765
13340
Alphaproteobacteria
GCT
Ser
>WENV170276749
CERO01019775
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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