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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170278691
CERQ01120516
331330
Gammaproteobacteria
TAC
Val
>WENV170278232
CERQ01069026
226555
Gammaproteobacteria
GTC
Asp
>WENV170278011
CERQ01045259
297858
Gammaproteobacteria
TGC
Ala
>WENV170278182
CERQ01062184
189904
Gammaproteobacteria
CCA
Trp
>WENV170277589
CERQ01003789
178164
Gammaproteobacteria
GAT
Ile
>WENV170279012
CERQ01215251
220813
Gammaproteobacteria
CCG
Arg
>WENV170278353
CERQ01083044
283282
Gammaproteobacteria
TTT
Lys
>WENV170277565
CERQ01001224
329164
Gammaproteobacteria
TTT
Lys
>WENV170278434
CERQ01093678
178540
Gammaproteobacteria
TGG
Pro
>WENV170277602
CERQ01005151
197498
Gammaproteobacteria
TGG
Pro
>WENV170279079
CERQ01234017
280812
Gammaproteobacteria
GAA
Phe
>WENV170277731
CERQ01017568
401684
Gammaproteobacteria
CCT
Arg
>WENV170277629
CERQ01007164
232119
Gammaproteobacteria
ACG
Arg
>WENV170277986
CERQ01042486
74048
Gammaproteobacteria
CAA
Leu
>WENV170277984
CERQ01042399
74048
Gammaproteobacteria
CAA
Leu
>WENV170277561
CERQ01000697
177028
Gammaproteobacteria
CAT
Met
>WENV170277992
CERQ01042706
176301
Gammaproteobacteria
GAT
Ile
>WENV170278559
CERQ01110831
180678
Gammaproteobacteria
CCG
Arg
>WENV170277931
CERQ01037921
8609
Gammaproteobacteria
GCT
Ser
>WENV170278271
CERQ01074161
408063
Gammaproteobacteria
TCC
Gly
>WENV170278736
CERQ01124106
180679
Gammaproteobacteria
CCA
Trp
>WENV170278035
CERQ01047287
180679
Gammaproteobacteria
CCA
Trp
>WENV170278025
CERQ01046291
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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