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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170280053
CERR01087000
140876
Alphaproteobacteria
>WENV170279590
CERR01037262
178510
Alphaproteobacteria
ACG
Arg
>WENV170279366
CERR01015289
308123
Alphaproteobacteria
CCA
Trp
>WENV170280135
CERR01095459
282748
Alphaproteobacteria
CGT
Thr
>WENV170280134
CERR01095459
480900
Alphaproteobacteria
GCA
Cys
>WENV170279368
CERR01015289
428327
Alphaproteobacteria
GCC
Gly
>WENV170280305
CERR01115007
398994
Alphaproteobacteria
GTT
Asn
>WENV170279610
CERR01039974
121990
Alphaproteobacteria
TAG
Leu
>WENV170280363
CERR01120258
121990
Alphaproteobacteria
TAG
Leu
>WENV170279793
CERR01055983
228432
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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