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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170283361
CERU01002757
193373
Alphaproteobacteria
CGG
Pro
>WENV170283478
CERU01018512
193373
Alphaproteobacteria
CGG
Pro
>WENV170283576
CERU01037170
193373
Alphaproteobacteria
CGG
Pro
>WENV170283339
CERU01000596
20437
Alphaproteobacteria
GGA
Ser
>WENV170283384
CERU01005559
201940
Alphaproteobacteria
CAT
Met
>WENV170283378
CERU01005052
400518
Alphaproteobacteria
GAA
Phe
>WENV170283360
CERU01002625
288727
Alphaproteobacteria
>WENV170283577
CERU01037170
178731
Alphaproteobacteria
GTC
Asp
>WENV170283362
CERU01002757
178731
Alphaproteobacteria
GTC
Asp
>WENV170283477
CERU01018512
178731
Alphaproteobacteria
GTC
Asp
>WENV170283365
CERU01002942
400516
Alphaproteobacteria
TTG
Gln
>WENV170283520
CERU01027934
178734
Alphaproteobacteria
TGG
Pro
>WENV170283404
CERU01007859
121250
Alphaproteobacteria
TAG
Leu
>WENV170283519
CERU01027934
178733
Alphaproteobacteria
CAT
Met
>WENV170283337
CERU01000490
195451
Alphaproteobacteria
GAC
Val
>WENV170283338
CERU01000490
195451
Alphaproteobacteria
GAC
Val
>WENV170283409
CERU01008715
102146
Alphaproteobacteria
GTA
Tyr
>WENV170283385
CERU01005612
73167
Alphaproteobacteria
GAG
Leu
>WENV170283656
CERU01059914
283510
Alphaproteobacteria
TTT
Lys
>WENV170283382
CERU01005515
192275
Alphaproteobacteria
GTG
His
>WENV170283373
CERU01004073
400517
Alphaproteobacteria
GGT
Thr
>WENV170283455
CERU01014721
481098
Alphaproteobacteria
CTG
Gln
>WENV170283407
CERU01008418
178736
Alphaproteobacteria
CCT
Arg
>WENV170283336
CERU01000306
282981
Alphaproteobacteria
CCA
Trp
>WENV170283374
CERU01004074
481099
Alphaproteobacteria
TCC
Gly
>WENV170283423
CERU01010164
13340
Alphaproteobacteria
GCT
Ser
>WENV170283493
CERU01021977
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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