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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170290639
CESA01035457
21965
Gammaproteobacteria
TGA
Ser
>WENV170290651
CESA01037523
158246
Gammaproteobacteria
GTC
Asp
>WENV170290458
CESA01018729
281440
Gammaproteobacteria
TGT
Thr
>WENV170290476
CESA01020239
480941
Gammaproteobacteria
TCC
Gly
>WENV170291208
CESA01099425
281435
Gammaproteobacteria
TTT
Lys
>WENV170291548
CESA01140499
281439
Gammaproteobacteria
GAA
Phe
>WENV170291801
CESA01213340
117915
Gammaproteobacteria
TAG
Leu
>WENV170290325
CESA01006918
314350
Gammaproteobacteria
CCA
Trp
>WENV170291449
CESA01130425
176796
Gammaproteobacteria
GGG
Pro
>WENV170290848
CESA01059643
281437
Gammaproteobacteria
CCA
Trp
>WENV170291265
CESA01107111
302377
Gammaproteobacteria
GTT
Asn
>WENV170291140
CESA01091145
281438
Gammaproteobacteria
GGC
Ala
>WENV170291254
CESA01104594
281438
Gammaproteobacteria
GGC
Ala
>WENV170290769
CESA01051409
399353
Gammaproteobacteria
GGT
Thr
>WENV170291159
CESA01093351
399353
Gammaproteobacteria
GGT
Thr
>WENV170291757
CESA01198567
317782
Gammaproteobacteria
TAC
Val
>WENV170290709
CESA01044178
176790
Gammaproteobacteria
ACG
Arg
>WENV170291319
CESA01115082
176790
Gammaproteobacteria
ACG
Arg
>WENV170290459
CESA01018729
140806
Gammaproteobacteria
GTA
Tyr
>WENV170290840
CESA01058472
281436
Gammaproteobacteria
TGC
Ala
>WENV170290708
CESA01044178
30083
Gammaproteobacteria
GCT
Ser
>WENV170291617
CESA01145661
179888
Gammaproteobacteria
ACG
Arg
>WENV170290821
CESA01055595
281434
Gammaproteobacteria
GTT
Asn
>WENV170291282
CESA01109091
281434
Gammaproteobacteria
GTT
Asn
>WENV170290604
CESA01031890
120822
Gammaproteobacteria
GAG
Leu
>WENV170291207
CESA01098934
8609
Gammaproteobacteria
GCT
Ser
>WENV170291753
CESA01197406
282018
Gammaproteobacteria
TGT
Thr
>WENV170290545
CESA01026227
281939
Gammaproteobacteria
TTT
Lys
>WENV170290979
CESA01071737
179710
Gammaproteobacteria
GAC
Val
>WENV170290768
CESA01051409
480549
Gammaproteobacteria
TCC
Gly
>WENV170290525
CESA01024579
282902
Gammaproteobacteria
TGT
Thr
>WENV170290451
CESA01017925
282902
Gammaproteobacteria
TGT
Thr
>WENV170291741
CESA01193760
74110
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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