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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170294069
CESC01034170
446430
Alphaproteobacteria
CAC
Val
>WENV170294052
CESC01032407
140876
Alphaproteobacteria
>WENV170294132
CESC01040324
400387
Alphaproteobacteria
GGT
Thr
>WENV170294076
CESC01034633
201940
Alphaproteobacteria
CAT
Met
>WENV170293684
CESC01001140
140893
Alphaproteobacteria
CAA
Leu
>WENV170294265
CESC01055326
100185
Alphaproteobacteria
GAG
Leu
>WENV170294613
CESC01094297
400514
Alphaproteobacteria
TTG
Gln
>WENV170294662
CESC01115824
180029
Alphaproteobacteria
CAT
Met
>WENV170294245
CESC01052665
121250
Alphaproteobacteria
TAG
Leu
>WENV170293972
CESC01026226
121250
Alphaproteobacteria
TAG
Leu
>WENV170294065
CESC01033852
427571
Alphaproteobacteria
GCC
Gly
>WENV170293892
CESC01017137
427571
Alphaproteobacteria
GCC
Gly
>WENV170294078
CESC01034801
140892
Alphaproteobacteria
TAG
Leu
>WENV170294039
CESC01031398
178509
Alphaproteobacteria
CCT
Arg
>WENV170294203
CESC01047965
73986
Alphaproteobacteria
CAG
Leu
>WENV170293829
CESC01012621
100184
Alphaproteobacteria
CAG
Leu
>WENV170293925
CESC01020716
178503
Alphaproteobacteria
GGG
Pro
>WENV170293918
CESC01019684
29727
Alphaproteobacteria
CGA
Ser
>WENV170294066
CESC01034117
192275
Alphaproteobacteria
GTG
His
>WENV170293681
CESC01000782
192275
Alphaproteobacteria
GTG
His
>WENV170294550
CESC01089287
400517
Alphaproteobacteria
GGT
Thr
>WENV170293978
CESC01026993
281650
Alphaproteobacteria
CCA
Trp
>WENV170294405
CESC01071408
32168
Alphaproteobacteria
CGA
Ser
>WENV170294692
CESC01131873
178728
Alphaproteobacteria
CGG
Pro
>WENV170293727
CESC01004223
400515
Alphaproteobacteria
GAC
Val
>WENV170294759
CESC01153239
398994
Alphaproteobacteria
GTT
Asn
>WENV170294070
CESC01034170
281676
Alphaproteobacteria
TAC
Val
>WENV170294255
CESC01054578
481096
Alphaproteobacteria
CCC
Gly
>WENV170294050
CESC01032407
398996
Alphaproteobacteria
GCC
Gly
>WENV170294051
CESC01032407
398996
Alphaproteobacteria
GCC
Gly
>WENV170294627
CESC01100947
403890
Alphaproteobacteria
GAC
Val
>WENV170294415
CESC01072451
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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