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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170302234
CESH01123378
178510
Alphaproteobacteria
ACG
Arg
>WENV170301478
CESH01039913
296698
Alphaproteobacteria
CGC
Ala
>WENV170302763
CESH01197985
424450
Alphaproteobacteria
GGT
Thr
>WENV170301090
CESH01004158
140876
Alphaproteobacteria
>WENV170302687
CESH01189450
193463
Alphaproteobacteria
CCT
Arg
>WENV170301307
CESH01023505
140963
Alphaproteobacteria
>WENV170301542
CESH01044944
201940
Alphaproteobacteria
CAT
Met
>WENV170301145
CESH01007408
201940
Alphaproteobacteria
CAT
Met
>WENV170303645
CESH01414462
400518
Alphaproteobacteria
GAA
Phe
>WENV170301782
CESH01069382
400530
Alphaproteobacteria
GAC
Val
>WENV170302950
CESH01233301
197241
Alphaproteobacteria
GGG
Pro
>WENV170302368
CESH01141089
290043
Alphaproteobacteria
TGC
Ala
>WENV170302474
CESH01157821
481268
Alphaproteobacteria
TCC
Gly
>WENV170302075
CESH01101633
193088
Alphaproteobacteria
GAT
Ile
>WENV170302195
CESH01116566
314617
Alphaproteobacteria
TAC
Val
>WENV170301217
CESH01013945
314617
Alphaproteobacteria
TAC
Val
>WENV170303527
CESH01317253
178731
Alphaproteobacteria
GTC
Asp
>WENV170302787
CESH01203682
400516
Alphaproteobacteria
TTG
Gln
>WENV170301883
CESH01079727
178734
Alphaproteobacteria
TGG
Pro
>WENV170302125
CESH01108201
121250
Alphaproteobacteria
TAG
Leu
>WENV170301882
CESH01079727
178733
Alphaproteobacteria
CAT
Met
>WENV170302702
CESH01191586
192131
Alphaproteobacteria
GTC
Asp
>WENV170301549
CESH01045848
102146
Alphaproteobacteria
GTA
Tyr
>WENV170303209
CESH01275222
192275
Alphaproteobacteria
GTG
His
>WENV170302992
CESH01239714
210458
Alphaproteobacteria
CGG
Pro
>WENV170301306
CESH01023466
400544
Alphaproteobacteria
GGT
Thr
>WENV170302847
CESH01213783
481098
Alphaproteobacteria
CTG
Gln
>WENV170301377
CESH01029731
176490
Alphaproteobacteria
CAT
Met
>WENV170301117
CESH01005702
212319
Alphaproteobacteria
GTG
His
>WENV170301886
CESH01080387
398994
Alphaproteobacteria
GTT
Asn
>WENV170302551
CESH01168255
398994
Alphaproteobacteria
GTT
Asn
>WENV170302712
CESH01192502
481099
Alphaproteobacteria
TCC
Gly
>WENV170302845
CESH01213715
29739
Alphaproteobacteria
CGA
Ser
>WENV170302181
CESH01114995
283257
Alphaproteobacteria
TTT
Lys
>WENV170303693
CESH01442729
283257
Alphaproteobacteria
TTT
Lys
>WENV170303782
CESH01492229
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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