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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170305794
CESI01239281
192236
Alphaproteobacteria
GTC
Asp
>WENV170304383
CESI01039555
186414
Alphaproteobacteria
CAT
Met
>WENV170304407
CESI01041859
186414
Alphaproteobacteria
CAT
Met
>WENV170304549
CESI01054309
186414
Alphaproteobacteria
CAT
Met
>WENV170304505
CESI01050106
179639
Alphaproteobacteria
ACG
Arg
>WENV170304178
CESI01024438
140876
Alphaproteobacteria
>WENV170304373
CESI01038578
140876
Alphaproteobacteria
>WENV170304694
CESI01069593
140876
Alphaproteobacteria
>WENV170304856
CESI01084706
140876
Alphaproteobacteria
>WENV170304380
CESI01039030
179390
Alphaproteobacteria
TGG
Pro
>WENV170305063
CESI01108218
179390
Alphaproteobacteria
TGG
Pro
>WENV170305401
CESI01143016
179390
Alphaproteobacteria
TGG
Pro
>WENV170304565
CESI01055864
178725
Alphaproteobacteria
GTG
His
>WENV170305281
CESI01132826
481268
Alphaproteobacteria
TCC
Gly
>WENV170305003
CESI01101067
481268
Alphaproteobacteria
TCC
Gly
>WENV170303988
CESI01009496
481268
Alphaproteobacteria
TCC
Gly
>WENV170303892
CESI01001857
481268
Alphaproteobacteria
TCC
Gly
>WENV170304832
CESI01083108
408543
Alphaproteobacteria
GAC
Val
>WENV170304167
CESI01024152
398999
Alphaproteobacteria
GGT
Thr
>WENV170303885
CESI01001069
178503
Alphaproteobacteria
GGG
Pro
>WENV170303932
CESI01003922
178503
Alphaproteobacteria
GGG
Pro
>WENV170303942
CESI01004817
178503
Alphaproteobacteria
GGG
Pro
>WENV170304628
CESI01063097
178503
Alphaproteobacteria
GGG
Pro
>WENV170304700
CESI01070346
281650
Alphaproteobacteria
CCA
Trp
>WENV170305753
CESI01204989
286018
Alphaproteobacteria
CCA
Trp
>WENV170304363
CESI01037804
398994
Alphaproteobacteria
GTT
Asn
>WENV170304566
CESI01055943
281676
Alphaproteobacteria
TAC
Val
>WENV170304203
CESI01026515
281676
Alphaproteobacteria
TAC
Val
>WENV170303911
CESI01003042
178784
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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