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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308307
CESL01017539
73123
Gammaproteobacteria
CAA
Leu
>WENV170309370
CESL01133350
25129
Gammaproteobacteria
TGA
Ser
>WENV170309138
CESL01103507
183804
Gammaproteobacteria
CAT
Met
>WENV170308177
CESL01007664
178164
Gammaproteobacteria
GAT
Ile
>WENV170309604
CESL01156872
281275
Gammaproteobacteria
TGT
Thr
>WENV170308893
CESL01071302
299414
Gammaproteobacteria
TTT
Lys
>WENV170308892
CESL01071302
299414
Gammaproteobacteria
TTT
Lys
>WENV170309410
CESL01139163
20618
Gammaproteobacteria
GGA
Ser
>WENV170309025
CESL01089038
29834
Gammaproteobacteria
GCT
Ser
>WENV170308612
CESL01044045
218635
Gammaproteobacteria
GAC
Val
>WENV170309377
CESL01134211
329164
Gammaproteobacteria
TTT
Lys
>WENV170308533
CESL01036240
329164
Gammaproteobacteria
TTT
Lys
>WENV170308521
CESL01035164
329164
Gammaproteobacteria
TTT
Lys
>WENV170309897
CESL01240859
176663
Gammaproteobacteria
GGG
Pro
>WENV170308339
CESL01020066
292006
Gammaproteobacteria
TGC
Ala
>WENV170308372
CESL01022268
480516
Gammaproteobacteria
GCA
Cys
>WENV170308280
CESL01015152
242732
Gammaproteobacteria
ACG
Arg
>WENV170308281
CESL01015152
242732
Gammaproteobacteria
ACG
Arg
>WENV170308498
CESL01032545
184459
Gammaproteobacteria
CAT
Met
>WENV170308674
CESL01049696
243308
Gammaproteobacteria
TGG
Pro
>WENV170309545
CESL01152995
56694
Gammaproteobacteria
GGA
Ser
>WENV170308103
CESL01001007
92638
Gammaproteobacteria
TAA
Leu
>WENV170309551
CESL01153283
401684
Gammaproteobacteria
CCT
Arg
>WENV170309510
CESL01148359
178169
Gammaproteobacteria
GAC
Val
>WENV170309577
CESL01154989
74048
Gammaproteobacteria
CAA
Leu
>WENV170309371
CESL01133350
306288
Gammaproteobacteria
GCC
Gly
>WENV170308640
CESL01046129
306288
Gammaproteobacteria
GCC
Gly
>WENV170308371
CESL01022268
306288
Gammaproteobacteria
GCC
Gly
>WENV170309454
CESL01142654
182374
Gammaproteobacteria
CAT
Met
>WENV170308235
CESL01012269
334421
Gammaproteobacteria
TGT
Thr
>WENV170309650
CESL01158469
346373
Gammaproteobacteria
GAA
Phe
>WENV170308201
CESL01009074
177028
Gammaproteobacteria
CAT
Met
>WENV170308493
CESL01032215
281418
Gammaproteobacteria
TGC
Ala
>WENV170308565
CESL01039156
180680
Gammaproteobacteria
GAC
Val
>WENV170308984
CESL01082312
176301
Gammaproteobacteria
GAT
Ile
>WENV170308492
CESL01032215
176301
Gammaproteobacteria
GAT
Ile
>WENV170308365
CESL01021943
405482
Gammaproteobacteria
TTG
Gln
>WENV170309193
CESL01109297
176665
Gammaproteobacteria
CGG
Pro
>WENV170308192
CESL01008680
201377
Gammaproteobacteria
TGG
Pro
>WENV170308676
CESL01049696
281283
Gammaproteobacteria
GTG
His
>WENV170308567
CESL01039701
286980
Gammaproteobacteria
TTT
Lys
>WENV170309608
CESL01157156
176478
Gammaproteobacteria
CAT
Met
>WENV170308969
CESL01079672
141076
Gammaproteobacteria
GTA
Tyr
>WENV170309226
CESL01113705
20968
Gammaproteobacteria
TGA
Ser
>WENV170308654
CESL01047403
180679
Gammaproteobacteria
CCA
Trp
>WENV170308583
CESL01041253
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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