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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170315638
CESO01174408
179390
Alphaproteobacteria
TGG
Pro
>WENV170315428
CESO01124109
201940
Alphaproteobacteria
CAT
Met
>WENV170314972
CESO01049230
197241
Alphaproteobacteria
GGG
Pro
>WENV170314570
CESO01009385
481268
Alphaproteobacteria
TCC
Gly
>WENV170315458
CESO01127151
481268
Alphaproteobacteria
TCC
Gly
>WENV170314975
CESO01049942
193088
Alphaproteobacteria
GAT
Ile
>WENV170314506
CESO01001810
281659
Alphaproteobacteria
TGC
Ala
>WENV170314574
CESO01010032
179941
Alphaproteobacteria
CAT
Met
>WENV170315236
CESO01088608
435083
Alphaproteobacteria
>WENV170315114
CESO01066634
435083
Alphaproteobacteria
>WENV170315597
CESO01145434
100184
Alphaproteobacteria
CAG
Leu
>WENV170314719
CESO01023566
118213
Alphaproteobacteria
TAG
Leu
>WENV170315013
CESO01054814
121990
Alphaproteobacteria
TAG
Leu
>WENV170314929
CESO01044549
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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