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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170315160
CESO01075936
196766
Gammaproteobacteria
GTT
Asn
>WENV170315177
CESO01078676
189904
Gammaproteobacteria
CCA
Trp
>WENV170315235
CESO01088448
189904
Gammaproteobacteria
CCA
Trp
>WENV170315615
CESO01159031
20664
Gammaproteobacteria
GCT
Ser
>WENV170314493
CESO01000278
178544
Gammaproteobacteria
CAT
Met
>WENV170314718
CESO01023383
179286
Gammaproteobacteria
GGG
Pro
>WENV170314543
CESO01005370
292194
Gammaproteobacteria
GGT
Thr
>WENV170314845
CESO01034976
284131
Gammaproteobacteria
GCC
Gly
>WENV170315431
CESO01124327
284131
Gammaproteobacteria
GCC
Gly
>WENV170315687
CESO01211679
483085
Gammaproteobacteria
GCA
Cys
>WENV170315533
CESO01133109
313571
Gammaproteobacteria
GCC
Gly
>WENV170314534
CESO01004511
313571
Gammaproteobacteria
GCC
Gly
>WENV170314532
CESO01004511
313571
Gammaproteobacteria
GCC
Gly
>WENV170314951
CESO01047161
184451
Gammaproteobacteria
CAT
Met
>WENV170315126
CESO01069738
299227
Gammaproteobacteria
GTT
Asn
>WENV170315500
CESO01131520
299227
Gammaproteobacteria
GTT
Asn
>WENV170315067
CESO01060954
176208
Gammaproteobacteria
TCT
Arg
>WENV170315594
CESO01145101
181513
Gammaproteobacteria
TGG
Pro
>WENV170314551
CESO01006075
176242
Gammaproteobacteria
CCG
Arg
>WENV170314996
CESO01052521
178466
Gammaproteobacteria
CCA
Trp
>WENV170315223
CESO01086750
178547
Gammaproteobacteria
TCT
Arg
>WENV170314611
CESO01014249
280812
Gammaproteobacteria
GAA
Phe
>WENV170315444
CESO01125872
176241
Gammaproteobacteria
CGG
Pro
>WENV170314671
CESO01019686
204522
Gammaproteobacteria
GAT
Ile
>WENV170314631
CESO01016850
78242
Gammaproteobacteria
TAA
Leu
>WENV170314967
CESO01048473
178169
Gammaproteobacteria
GAC
Val
>WENV170315493
CESO01131090
74048
Gammaproteobacteria
CAA
Leu
>WENV170315134
CESO01070596
438662
Gammaproteobacteria
TTG
Gln
>WENV170314823
CESO01033488
242775
Gammaproteobacteria
TGG
Pro
>WENV170314998
CESO01052729
242775
Gammaproteobacteria
TGG
Pro
>WENV170315268
CESO01094126
334421
Gammaproteobacteria
TGT
Thr
>WENV170315194
CESO01081249
334421
Gammaproteobacteria
TGT
Thr
>WENV170314983
CESO01050368
334421
Gammaproteobacteria
TGT
Thr
>WENV170314692
CESO01021011
186418
Gammaproteobacteria
GTC
Asp
>WENV170314642
CESO01018026
186418
Gammaproteobacteria
GTC
Asp
>WENV170315550
CESO01133907
179436
Gammaproteobacteria
GAC
Val
>WENV170314889
CESO01040034
8609
Gammaproteobacteria
GCT
Ser
>WENV170315326
CESO01106834
400372
Gammaproteobacteria
CCT
Arg
>WENV170315771
CESO01266966
296680
Gammaproteobacteria
GTT
Asn
>WENV170314541
CESO01005163
281939
Gammaproteobacteria
TTT
Lys
>WENV170314580
CESO01010493
186591
Gammaproteobacteria
ACG
Arg
>WENV170315432
CESO01124455
216016
Gammaproteobacteria
CAT
Met
>WENV170315872
CESO01310246
179613
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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