This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170318337
CESQ01034119
158246
Gammaproteobacteria
GTC
Asp
>WENV170319577
CESQ01177486
73123
Gammaproteobacteria
CAA
Leu
>WENV170318257
CESQ01025757
20664
Gammaproteobacteria
GCT
Ser
>WENV170318339
CESQ01034136
328691
Gammaproteobacteria
GGT
Thr
>WENV170318418
CESQ01041633
180053
Gammaproteobacteria
CAT
Met
>WENV170318950
CESQ01098799
20618
Gammaproteobacteria
GGA
Ser
>WENV170318331
CESQ01033345
20618
Gammaproteobacteria
GGA
Ser
>WENV170318168
CESQ01019497
178538
Gammaproteobacteria
GTC
Asp
>WENV170318334
CESQ01034025
329164
Gammaproteobacteria
TTT
Lys
>WENV170318335
CESQ01034025
329164
Gammaproteobacteria
TTT
Lys
>WENV170320320
CESQ01317292
178535
Gammaproteobacteria
CCT
Arg
>WENV170320036
CESQ01221784
176663
Gammaproteobacteria
GGG
Pro
>WENV170319050
CESQ01110446
74339
Gammaproteobacteria
GAG
Leu
>WENV170319674
CESQ01189211
351236
Gammaproteobacteria
TTT
Lys
>WENV170319538
CESQ01170607
351236
Gammaproteobacteria
TTT
Lys
>WENV170318905
CESQ01091756
292006
Gammaproteobacteria
TGC
Ala
>WENV170320420
CESQ01386572
292006
Gammaproteobacteria
TGC
Ala
>WENV170318704
CESQ01072206
480516
Gammaproteobacteria
GCA
Cys
>WENV170320417
CESQ01385542
178541
Gammaproteobacteria
CGG
Pro
>WENV170318458
CESQ01045484
56694
Gammaproteobacteria
GGA
Ser
>WENV170319037
CESQ01109214
176545
Gammaproteobacteria
CAT
Met
>WENV170317989
CESQ01006568
232119
Gammaproteobacteria
ACG
Arg
>WENV170319403
CESQ01151148
74048
Gammaproteobacteria
CAA
Leu
>WENV170318651
CESQ01067103
74048
Gammaproteobacteria
CAA
Leu
>WENV170317951
CESQ01002772
306288
Gammaproteobacteria
GCC
Gly
>WENV170319629
CESQ01183231
176664
Gammaproteobacteria
CCT
Arg
>WENV170318605
CESQ01060948
346373
Gammaproteobacteria
GAA
Phe
>WENV170319543
CESQ01171394
346373
Gammaproteobacteria
GAA
Phe
>WENV170319950
CESQ01215563
346373
Gammaproteobacteria
GAA
Phe
>WENV170318671
CESQ01069350
370389
Gammaproteobacteria
GGC
Ala
>WENV170319611
CESQ01181029
370389
Gammaproteobacteria
GGC
Ala
>WENV170319476
CESQ01161676
180680
Gammaproteobacteria
GAC
Val
>WENV170320018
CESQ01220554
180680
Gammaproteobacteria
GAC
Val
>WENV170320479
CESQ01411661
180678
Gammaproteobacteria
CCG
Arg
>WENV170318620
CESQ01063082
176665
Gammaproteobacteria
CGG
Pro
>WENV170318672
CESQ01069447
281283
Gammaproteobacteria
GTG
His
>WENV170318934
CESQ01095614
186591
Gammaproteobacteria
ACG
Arg
>WENV170318064
CESQ01011071
186591
Gammaproteobacteria
ACG
Arg
>WENV170319540
CESQ01170769
180679
Gammaproteobacteria
CCA
Trp
>WENV170319329
CESQ01141623
180679
Gammaproteobacteria
CCA
Trp
>WENV170318975
CESQ01101735
180679
Gammaproteobacteria
CCA
Trp
>WENV170318309
CESQ01030703
180679
Gammaproteobacteria
CCA
Trp
>WENV170318584
CESQ01059844
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK