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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170320805
CESR01011411
289412
Alphaproteobacteria
CCA
Trp
>WENV170320837
CESR01014190
296763
Alphaproteobacteria
CCA
Trp
>WENV170321377
CESR01049051
400516
Alphaproteobacteria
TTG
Gln
>WENV170321443
CESR01055609
176153
Alphaproteobacteria
CAT
Met
>WENV170321958
CESR01094749
176153
Alphaproteobacteria
CAT
Met
>WENV170322048
CESR01104974
400515
Alphaproteobacteria
GAC
Val
>WENV170322383
CESR01136984
190609
Alphaproteobacteria
TCT
Arg
>WENV170322461
CESR01145843
296698
Alphaproteobacteria
CGC
Ala
>WENV170322561
CESR01154825
283510
Alphaproteobacteria
TTT
Lys
>WENV170322946
CESR01184287
73523
Alphaproteobacteria
CAG
Leu
>WENV170322954
CESR01190788
481098
Alphaproteobacteria
CTG
Gln
>WENV170322975
CESR01205571
121250
Alphaproteobacteria
TAG
Leu
>WENV170323059
CESR01247182
432650
Alphaproteobacteria
GAA
Phe
>WENV170323090
CESR01264722
281676
Alphaproteobacteria
TAC
Val
>WENV170323280
CESR01321987
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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