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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170323455
CESS01001066
481268
Alphaproteobacteria
TCC
Gly
>WENV170323814
CESS01027895
435083
Alphaproteobacteria
>WENV170323924
CESS01036876
179941
Alphaproteobacteria
CAT
Met
>WENV170324196
CESS01059969
400223
Alphaproteobacteria
GGT
Thr
>WENV170324268
CESS01066805
305449
Alphaproteobacteria
CGT
Thr
>WENV170324299
CESS01070446
408543
Alphaproteobacteria
GAC
Val
>WENV170324353
CESS01074622
140876
Alphaproteobacteria
>WENV170324361
CESS01075549
424450
Alphaproteobacteria
GGT
Thr
>WENV170324389
CESS01078837
201940
Alphaproteobacteria
CAT
Met
>WENV170324471
CESS01085467
338616
Alphaproteobacteria
TGC
Ala
>WENV170324732
CESS01101370
282966
Alphaproteobacteria
TTT
Lys
>WENV170324908
CESS01160101
308123
Alphaproteobacteria
CCA
Trp
>WENV170325044
CESS01188532
29729
Alphaproteobacteria
GCT
Ser
>WENV170325064
CESS01191842
427428
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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