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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170323447
CESS01000166
283486
Gammaproteobacteria
TGT
Thr
>WENV170323499
CESS01004115
13452
Gammaproteobacteria
GCT
Ser
>WENV170323500
CESS01004115
232119
Gammaproteobacteria
ACG
Arg
>WENV170323543
CESS01006880
451630
Gammaproteobacteria
TCC
Gly
>WENV170323699
CESS01017530
176544
Gammaproteobacteria
CAT
Met
>WENV170323716
CESS01019332
282683
Gammaproteobacteria
GGC
Ala
>WENV170323738
CESS01020956
481678
Gammaproteobacteria
GCA
Cys
>WENV170324023
CESS01044567
20407
Gammaproteobacteria
TGA
Ser
>WENV170324024
CESS01044567
8605
Gammaproteobacteria
>WENV170324136
CESS01053410
180680
Gammaproteobacteria
GAC
Val
>WENV170324159
CESS01055603
177028
Gammaproteobacteria
CAT
Met
>WENV170324283
CESS01068764
178466
Gammaproteobacteria
CCA
Trp
>WENV170324328
CESS01072483
281668
Gammaproteobacteria
TTT
Lys
>WENV170324429
CESS01082582
20618
Gammaproteobacteria
GGA
Ser
>WENV170324469
CESS01085408
178469
Gammaproteobacteria
CAT
Met
>WENV170324485
CESS01086659
285547
Gammaproteobacteria
TTG
Gln
>WENV170324506
CESS01088366
297858
Gammaproteobacteria
TGC
Ala
>WENV170324574
CESS01093227
74048
Gammaproteobacteria
CAA
Leu
>WENV170324670
CESS01096531
283222
Gammaproteobacteria
GTG
His
>WENV170324671
CESS01096555
400372
Gammaproteobacteria
CCT
Arg
>WENV170324734
CESS01102702
20487
Gammaproteobacteria
TGA
Ser
>WENV170324744
CESS01107646
282902
Gammaproteobacteria
TGT
Thr
>WENV170324748
CESS01108890
350703
Gammaproteobacteria
TTT
Lys
>WENV170324851
CESS01144330
311084
Gammaproteobacteria
GCC
Gly
>WENV170324852
CESS01144330
480629
Gammaproteobacteria
GCA
Cys
>WENV170325075
CESS01193819
401684
Gammaproteobacteria
CCT
Arg
>WENV170325084
CESS01195859
118341
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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