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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170331892
CESW01105538
193373
Alphaproteobacteria
CGG
Pro
>WENV170331729
CESW01086863
201940
Alphaproteobacteria
CAT
Met
>WENV170331730
CESW01086916
201940
Alphaproteobacteria
CAT
Met
>WENV170331969
CESW01116168
201940
Alphaproteobacteria
CAT
Met
>WENV170332226
CESW01141543
201940
Alphaproteobacteria
CAT
Met
>WENV170332314
CESW01146330
197241
Alphaproteobacteria
GGG
Pro
>WENV170331209
CESW01037173
290043
Alphaproteobacteria
TGC
Ala
>WENV170331494
CESW01065017
305403
Alphaproteobacteria
>WENV170332150
CESW01136458
400544
Alphaproteobacteria
GGT
Thr
>WENV170331979
CESW01117279
400544
Alphaproteobacteria
GGT
Thr
>WENV170331592
CESW01074491
281650
Alphaproteobacteria
CCA
Trp
>WENV170332565
CESW01222439
481098
Alphaproteobacteria
CTG
Gln
>WENV170331669
CESW01081209
190625
Alphaproteobacteria
ACG
Arg
>WENV170331739
CESW01087958
400045
Alphaproteobacteria
GCC
Gly
>WENV170331821
CESW01097494
488318
Alphaproteobacteria
TCC
Gly
>WENV170331062
CESW01023589
398994
Alphaproteobacteria
GTT
Asn
>WENV170330772
CESW01000466
289744
Alphaproteobacteria
CGT
Thr
>WENV170331337
CESW01049777
283257
Alphaproteobacteria
TTT
Lys
>WENV170331974
CESW01116934
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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