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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170333516
CESY01054992
296698
Alphaproteobacteria
CGC
Ala
>WENV170334564
CESY01255030
20437
Alphaproteobacteria
GGA
Ser
>WENV170333123
CESY01008458
193088
Alphaproteobacteria
GAT
Ile
>WENV170333988
CESY01115517
178734
Alphaproteobacteria
TGG
Pro
>WENV170333987
CESY01115517
178733
Alphaproteobacteria
CAT
Met
>WENV170333028
CESY01000044
102146
Alphaproteobacteria
GTA
Tyr
>WENV170334284
CESY01155182
192275
Alphaproteobacteria
GTG
His
>WENV170334497
CESY01225395
481098
Alphaproteobacteria
CTG
Gln
>WENV170334646
CESY01283501
282981
Alphaproteobacteria
CCA
Trp
>WENV170333263
CESY01023732
296763
Alphaproteobacteria
CCA
Trp
>WENV170333124
CESY01008458
338616
Alphaproteobacteria
TGC
Ala
>WENV170333708
CESY01079383
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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