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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170335592
CESZ01077487
176225
Alphaproteobacteria
TGG
Pro
>WENV170334964
CESZ01021836
140876
Alphaproteobacteria
>WENV170335151
CESZ01035231
193088
Alphaproteobacteria
GAT
Ile
>WENV170335412
CESZ01060822
178731
Alphaproteobacteria
GTC
Asp
>WENV170335104
CESZ01031379
75222
Alphaproteobacteria
GAG
Leu
>WENV170335266
CESZ01044941
400249
Alphaproteobacteria
GCC
Gly
>WENV170335977
CESZ01112554
102146
Alphaproteobacteria
GTA
Tyr
>WENV170335710
CESZ01091857
178503
Alphaproteobacteria
GGG
Pro
>WENV170335272
CESZ01046071
402067
Alphaproteobacteria
GCC
Gly
>WENV170335596
CESZ01077727
192275
Alphaproteobacteria
GTG
His
>WENV170335175
CESZ01037836
192275
Alphaproteobacteria
GTG
His
>WENV170334985
CESZ01023316
21542
Alphaproteobacteria
GGA
Ser
>WENV170335840
CESZ01102985
400544
Alphaproteobacteria
GGT
Thr
>WENV170336073
CESZ01154889
400517
Alphaproteobacteria
GGT
Thr
>WENV170335333
CESZ01052227
281650
Alphaproteobacteria
CCA
Trp
>WENV170336168
CESZ01190164
178736
Alphaproteobacteria
CCT
Arg
>WENV170335461
CESZ01065185
398994
Alphaproteobacteria
GTT
Asn
>WENV170334699
CESZ01000868
296763
Alphaproteobacteria
CCA
Trp
>WENV170334765
CESZ01006271
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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