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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170334744
CESZ01004145
402532
Bacteroidota
GCC
Gly
>WENV170334758
CESZ01005786
400818
Bacteroidota
TTC
Glu
>WENV170335191
CESZ01039013
400818
Bacteroidota
TTC
Glu
>WENV170335267
CESZ01045141
400818
Bacteroidota
TTC
Glu
>WENV170335617
CESZ01081029
400818
Bacteroidota
TTC
Glu
>WENV170335500
CESZ01068960
288475
Bacteroidota
GCC
Gly
>WENV170335255
CESZ01044339
156595
Bacteroidota
TGG
Pro
>WENV170334730
CESZ01003004
281538
Bacteroidota
GAA
Phe
>WENV170335127
CESZ01033009
281538
Bacteroidota
GAA
Phe
>WENV170335350
CESZ01054630
281538
Bacteroidota
GAA
Phe
>WENV170335364
CESZ01056404
281538
Bacteroidota
GAA
Phe
>WENV170335939
CESZ01109139
156605
Bacteroidota
GAC
Val
>WENV170335732
CESZ01094080
156605
Bacteroidota
GAC
Val
>WENV170335521
CESZ01071341
156605
Bacteroidota
GAC
Val
>WENV170334774
CESZ01007125
402171
Bacteroidota
TTC
Glu
>WENV170335068
CESZ01028995
287318
Bacteroidota
GAA
Phe
>WENV170335451
CESZ01064337
287318
Bacteroidota
GAA
Phe
>WENV170335681
CESZ01088253
155808
Bacteroidota
TGG
Pro
>WENV170335212
CESZ01040045
291910
Bacteroidota
TTG
Gln
>WENV170335316
CESZ01050191
121312
Bacteroidota
TAG
Leu
>WENV170334820
CESZ01010096
298625
Bacteroidota
CAT
Met
>WENV170335410
CESZ01060712
298625
Bacteroidota
CAT
Met
>WENV170334911
CESZ01017399
156596
Bacteroidota
TAC
Val
>WENV170335048
CESZ01027209
299065
Bacteroidota
TTG
Gln
>WENV170334907
CESZ01016614
286464
Bacteroidota
CAT
Met
>WENV170335387
CESZ01058894
117927
Bacteroidota
TAG
Leu
>WENV170335231
CESZ01041445
181598
Bacteroidota
GTT
Asn
>WENV170334754
CESZ01005128
284409
Bacteroidota
CAT
Met
>WENV170334709
CESZ01001353
284409
Bacteroidota
CAT
Met
>WENV170335312
CESZ01049808
182234
Bacteroidota
TGT
Thr
>WENV170334755
CESZ01005167
296664
Bacteroidota
GAA
Phe
>WENV170335314
CESZ01049808
408604
Bacteroidota
GGT
Thr
>WENV170335518
CESZ01071086
156340
Bacteroidota
GGG
Pro
>WENV170335384
CESZ01058643
56162
Bacteroidota
TGA
Ser
>WENV170335924
CESZ01108482
299085
Bacteroidota
TTT
Lys
>WENV170335934
CESZ01109047
299085
Bacteroidota
TTT
Lys
>WENV170336236
CESZ01204532
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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