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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170351445
CETH01149807
284706
Gammaproteobacteria
GTT
Asn
>WENV170351062
CETH01123642
158246
Gammaproteobacteria
GTC
Asp
>WENV170351437
CETH01149139
29419
Gammaproteobacteria
GGA
Ser
>WENV170349307
CETH01017795
20618
Gammaproteobacteria
GGA
Ser
>WENV170350001
CETH01056003
292194
Gammaproteobacteria
GGT
Thr
>WENV170350600
CETH01092151
329164
Gammaproteobacteria
TTT
Lys
>WENV170353029
CETH01429694
184459
Gammaproteobacteria
CAT
Met
>WENV170349938
CETH01052937
292174
Gammaproteobacteria
GAA
Phe
>WENV170352730
CETH01331480
290359
Gammaproteobacteria
TTT
Lys
>WENV170349692
CETH01037180
118413
Gammaproteobacteria
TAG
Leu
>WENV170348992
CETH01002871
401684
Gammaproteobacteria
CCT
Arg
>WENV170350718
CETH01100272
74048
Gammaproteobacteria
CAA
Leu
>WENV170350825
CETH01108044
481678
Gammaproteobacteria
GCA
Cys
>WENV170350227
CETH01070040
334421
Gammaproteobacteria
TGT
Thr
>WENV170348989
CETH01002844
177028
Gammaproteobacteria
CAT
Met
>WENV170351443
CETH01149523
239021
Gammaproteobacteria
TCT
Arg
>WENV170350009
CETH01056530
176301
Gammaproteobacteria
GAT
Ile
>WENV170349844
CETH01046642
481314
Gammaproteobacteria
GCA
Cys
>WENV170351345
CETH01143309
315775
Gammaproteobacteria
TGT
Thr
>WENV170352695
CETH01315508
141076
Gammaproteobacteria
GTA
Tyr
>WENV170350427
CETH01080512
186591
Gammaproteobacteria
ACG
Arg
>WENV170350426
CETH01080512
186591
Gammaproteobacteria
ACG
Arg
>WENV170350425
CETH01080512
186591
Gammaproteobacteria
ACG
Arg
>WENV170350893
CETH01112379
286691
Gammaproteobacteria
GTG
His
>WENV170349999
CETH01055966
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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