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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170363127
CETM01128498
334086
Alphaproteobacteria
GGC
Ala
>WENV170363025
CETM01119930
424450
Alphaproteobacteria
GGT
Thr
>WENV170362410
CETM01070125
193463
Alphaproteobacteria
CCT
Arg
>WENV170363419
CETM01158635
178263
Alphaproteobacteria
GTG
His
>WENV170363015
CETM01119212
193088
Alphaproteobacteria
GAT
Ile
>WENV170363508
CETM01165416
178734
Alphaproteobacteria
TGG
Pro
>WENV170361542
CETM01012846
121250
Alphaproteobacteria
TAG
Leu
>WENV170363507
CETM01165416
178733
Alphaproteobacteria
CAT
Met
>WENV170364583
CETM01348495
178503
Alphaproteobacteria
GGG
Pro
>WENV170363451
CETM01161636
192275
Alphaproteobacteria
GTG
His
>WENV170362435
CETM01071439
212319
Alphaproteobacteria
GTG
His
>WENV170361537
CETM01012554
228432
Alphaproteobacteria
TGG
Pro
>WENV170364610
CETM01363414
488318
Alphaproteobacteria
TCC
Gly
>WENV170364787
CETM01432866
282981
Alphaproteobacteria
CCA
Trp
>WENV170364934
CETM01455901
296763
Alphaproteobacteria
CCA
Trp
>WENV170361641
CETM01020356
481099
Alphaproteobacteria
TCC
Gly
>WENV170363618
CETM01174740
428327
Alphaproteobacteria
GCC
Gly
>WENV170364496
CETM01308572
118150
Alphaproteobacteria
TAG
Leu
>WENV170362838
CETM01104078
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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