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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170365002
CETN01003907
218791
Gammaproteobacteria
ACG
Arg
>WENV170365680
CETN01148069
74048
Gammaproteobacteria
CAA
Leu
>WENV170365539
CETN01096759
73863
Gammaproteobacteria
CAG
Leu
>WENV170365699
CETN01152679
176544
Gammaproteobacteria
CAT
Met
>WENV170365458
CETN01077596
314350
Gammaproteobacteria
CCA
Trp
>WENV170365566
CETN01107625
176241
Gammaproteobacteria
CGG
Pro
>WENV170365097
CETN01014778
178025
Gammaproteobacteria
GAC
Val
>WENV170365615
CETN01128148
180680
Gammaproteobacteria
GAC
Val
>WENV170365109
CETN01016668
178164
Gammaproteobacteria
GAT
Ile
>WENV170365005
CETN01003935
480516
Gammaproteobacteria
GCA
Cys
>WENV170365635
CETN01134380
29419
Gammaproteobacteria
GGA
Ser
>WENV170365655
CETN01141189
20618
Gammaproteobacteria
GGA
Ser
>WENV170365562
CETN01105568
176063
Gammaproteobacteria
GGG
Pro
>WENV170365435
CETN01074924
117821
Gammaproteobacteria
GTA
Tyr
>WENV170365617
CETN01128736
73063
Gammaproteobacteria
TAA
Leu
>WENV170365007
CETN01003980
317782
Gammaproteobacteria
TAC
Val
>WENV170365673
CETN01147228
56094
Gammaproteobacteria
TGA
Ser
>WENV170365110
CETN01016668
337925
Gammaproteobacteria
TGC
Ala
>WENV170365046
CETN01007256
229289
Gammaproteobacteria
TGG
Pro
>WENV170365059
CETN01009461
282902
Gammaproteobacteria
TGT
Thr
>WENV170365448
CETN01076144
400354
Gammaproteobacteria
TTG
Gln
>WENV170365022
CETN01005385
301064
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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