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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170366273
CETO01048342
363863
Gammaproteobacteria
CCA
Trp
>WENV170366969
CETO01163949
176064
Gammaproteobacteria
CAT
Met
>WENV170366122
CETO01035018
297858
Gammaproteobacteria
TGC
Ala
>WENV170367051
CETO01174323
29392
Gammaproteobacteria
GCT
Ser
>WENV170365892
CETO01011642
20664
Gammaproteobacteria
GCT
Ser
>WENV170366837
CETO01130641
306827
Gammaproteobacteria
TTT
Lys
>WENV170366160
CETO01038709
318157
Gammaproteobacteria
GTT
Asn
>WENV170366053
CETO01028020
281275
Gammaproteobacteria
TGT
Thr
>WENV170366658
CETO01085291
118218
Gammaproteobacteria
TAG
Leu
>WENV170366056
CETO01028020
281276
Gammaproteobacteria
GGT
Thr
>WENV170367010
CETO01169884
176061
Gammaproteobacteria
TCG
Arg
>WENV170366713
CETO01088261
20618
Gammaproteobacteria
GGA
Ser
>WENV170366563
CETO01076566
20618
Gammaproteobacteria
GGA
Ser
>WENV170366352
CETO01058975
197233
Gammaproteobacteria
CAT
Met
>WENV170367045
CETO01174014
218635
Gammaproteobacteria
GAC
Val
>WENV170366051
CETO01027997
292194
Gammaproteobacteria
GGT
Thr
>WENV170366675
CETO01086459
480653
Gammaproteobacteria
GCA
Cys
>WENV170366644
CETO01084807
176520
Gammaproteobacteria
CAT
Met
>WENV170365769
CETO01000459
284693
Gammaproteobacteria
TTC
Glu
>WENV170366055
CETO01028020
399250
Gammaproteobacteria
TCC
Gly
>WENV170366353
CETO01059079
220813
Gammaproteobacteria
CCG
Arg
>WENV170366305
CETO01053587
444310
Gammaproteobacteria
TTG
Gln
>WENV170365920
CETO01013568
329164
Gammaproteobacteria
TTT
Lys
>WENV170365921
CETO01013568
329164
Gammaproteobacteria
TTT
Lys
>WENV170365896
CETO01011922
178535
Gammaproteobacteria
CCT
Arg
>WENV170366730
CETO01088613
176663
Gammaproteobacteria
GGG
Pro
>WENV170366884
CETO01146331
20410
Gammaproteobacteria
TGA
Ser
>WENV170366234
CETO01044414
178540
Gammaproteobacteria
TGG
Pro
>WENV170365788
CETO01002164
292006
Gammaproteobacteria
TGC
Ala
>WENV170366640
CETO01084279
282413
Gammaproteobacteria
GTT
Asn
>WENV170366896
CETO01148657
73498
Gammaproteobacteria
CAA
Leu
>WENV170365873
CETO01009780
480516
Gammaproteobacteria
GCA
Cys
>WENV170366427
CETO01065755
184459
Gammaproteobacteria
CAT
Met
>WENV170366324
CETO01056219
184459
Gammaproteobacteria
CAT
Met
>WENV170365909
CETO01012792
178541
Gammaproteobacteria
CGG
Pro
>WENV170366272
CETO01048342
443066
Gammaproteobacteria
GGT
Thr
>WENV170366366
CETO01060698
197498
Gammaproteobacteria
TGG
Pro
>WENV170366054
CETO01028020
140800
Gammaproteobacteria
GTA
Tyr
>WENV170366668
CETO01086193
176545
Gammaproteobacteria
CAT
Met
>WENV170366897
CETO01148797
56340
Gammaproteobacteria
GGA
Ser
>WENV170366071
CETO01029954
118413
Gammaproteobacteria
TAG
Leu
>WENV170366734
CETO01088801
176065
Gammaproteobacteria
CCT
Arg
>WENV170366036
CETO01025716
74048
Gammaproteobacteria
CAA
Leu
>WENV170366699
CETO01087798
306288
Gammaproteobacteria
GCC
Gly
>WENV170366687
CETO01087317
306288
Gammaproteobacteria
GCC
Gly
>WENV170365872
CETO01009780
306288
Gammaproteobacteria
GCC
Gly
>WENV170366612
CETO01081480
398943
Gammaproteobacteria
GAC
Val
>WENV170366484
CETO01068803
334421
Gammaproteobacteria
TGT
Thr
>WENV170366710
CETO01088156
346373
Gammaproteobacteria
GAA
Phe
>WENV170367042
CETO01173936
118414
Gammaproteobacteria
TAG
Leu
>WENV170365774
CETO01000486
239021
Gammaproteobacteria
TCT
Arg
>WENV170366035
CETO01025691
178550
Gammaproteobacteria
ACG
Arg
>WENV170365936
CETO01015292
180680
Gammaproteobacteria
GAC
Val
>WENV170365881
CETO01010538
176301
Gammaproteobacteria
GAT
Ile
>WENV170365787
CETO01002164
176301
Gammaproteobacteria
GAT
Ile
>WENV170365876
CETO01010221
180678
Gammaproteobacteria
CCG
Arg
>WENV170366729
CETO01088605
176665
Gammaproteobacteria
CGG
Pro
>WENV170366811
CETO01117443
362336
Gammaproteobacteria
TTT
Lys
>WENV170367054
CETO01174357
400354
Gammaproteobacteria
TTG
Gln
>WENV170366312
CETO01054470
481314
Gammaproteobacteria
GCA
Cys
>WENV170366398
CETO01063943
280696
Gammaproteobacteria
TGT
Thr
>WENV170366705
CETO01088013
201377
Gammaproteobacteria
TGG
Pro
>WENV170365794
CETO01003199
315775
Gammaproteobacteria
TGT
Thr
>WENV170366678
CETO01086538
176478
Gammaproteobacteria
CAT
Met
>WENV170365857
CETO01008833
186591
Gammaproteobacteria
ACG
Arg
>WENV170365856
CETO01008833
186591
Gammaproteobacteria
ACG
Arg
>WENV170366270
CETO01048342
140861
Gammaproteobacteria
GTA
Tyr
>WENV170366562
CETO01076451
20968
Gammaproteobacteria
TGA
Ser
>WENV170366670
CETO01086292
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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