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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170370064
CETR01060587
123265
Gammaproteobacteria
GAG
Leu
>WENV170371222
CETR01264106
176064
Gammaproteobacteria
CAT
Met
>WENV170369426
CETR01005947
183804
Gammaproteobacteria
CAT
Met
>WENV170371254
CETR01268087
29392
Gammaproteobacteria
GCT
Ser
>WENV170371043
CETR01229150
56094
Gammaproteobacteria
TGA
Ser
>WENV170370914
CETR01188567
281437
Gammaproteobacteria
CCA
Trp
>WENV170370273
CETR01082839
20618
Gammaproteobacteria
GGA
Ser
>WENV170371136
CETR01248138
480653
Gammaproteobacteria
GCA
Cys
>WENV170370735
CETR01134150
178538
Gammaproteobacteria
GTC
Asp
>WENV170370042
CETR01058517
292006
Gammaproteobacteria
TGC
Ala
>WENV170370482
CETR01106887
181513
Gammaproteobacteria
TGG
Pro
>WENV170370772
CETR01135861
56694
Gammaproteobacteria
GGA
Ser
>WENV170369385
CETR01002122
197498
Gammaproteobacteria
TGG
Pro
>WENV170369998
CETR01053416
299855
Gammaproteobacteria
TAC
Val
>WENV170370528
CETR01113720
46836
Gammaproteobacteria
TAA
Leu
>WENV170370964
CETR01205523
401684
Gammaproteobacteria
CCT
Arg
>WENV170370647
CETR01127052
176065
Gammaproteobacteria
CCT
Arg
>WENV170369978
CETR01052091
481678
Gammaproteobacteria
GCA
Cys
>WENV170370413
CETR01101067
306288
Gammaproteobacteria
GCC
Gly
>WENV170369581
CETR01017673
306288
Gammaproteobacteria
GCC
Gly
>WENV170369390
CETR01002595
280699
Gammaproteobacteria
GGT
Thr
>WENV170369977
CETR01052091
319139
Gammaproteobacteria
GCC
Gly
>WENV170370022
CETR01055657
118414
Gammaproteobacteria
TAG
Leu
>WENV170370337
CETR01090440
176301
Gammaproteobacteria
GAT
Ile
>WENV170371132
CETR01247547
180678
Gammaproteobacteria
CCG
Arg
>WENV170369628
CETR01021039
180681
Gammaproteobacteria
TGG
Pro
>WENV170371112
CETR01242871
176063
Gammaproteobacteria
GGG
Pro
>WENV170371252
CETR01267983
176063
Gammaproteobacteria
GGG
Pro
>WENV170370524
CETR01113087
280696
Gammaproteobacteria
TGT
Thr
>WENV170369896
CETR01043930
201377
Gammaproteobacteria
TGG
Pro
>WENV170370268
CETR01082117
281791
Gammaproteobacteria
GTG
His
>WENV170369647
CETR01022649
285826
Gammaproteobacteria
GGT
Thr
>WENV170370353
CETR01091883
180679
Gammaproteobacteria
CCA
Trp
>WENV170370193
CETR01073265
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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