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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170372592
CETS01113792
73123
Gammaproteobacteria
CAA
Leu
>WENV170372724
CETS01128639
176064
Gammaproteobacteria
CAT
Met
>WENV170371755
CETS01036687
297858
Gammaproteobacteria
TGC
Ala
>WENV170372281
CETS01079664
29392
Gammaproteobacteria
GCT
Ser
>WENV170373500
CETS01294765
176061
Gammaproteobacteria
TCG
Arg
>WENV170372459
CETS01098854
20618
Gammaproteobacteria
GGA
Ser
>WENV170373231
CETS01221109
218635
Gammaproteobacteria
GAC
Val
>WENV170371824
CETS01042607
292194
Gammaproteobacteria
GGT
Thr
>WENV170372968
CETS01151598
480653
Gammaproteobacteria
GCA
Cys
>WENV170371858
CETS01045792
220813
Gammaproteobacteria
CCG
Arg
>WENV170373064
CETS01160082
176868
Gammaproteobacteria
CAT
Met
>WENV170372449
CETS01097501
73830
Gammaproteobacteria
CAA
Leu
>WENV170372077
CETS01062767
451238
Gammaproteobacteria
GCC
Gly
>WENV170372383
CETS01090589
292006
Gammaproteobacteria
TGC
Ala
>WENV170371295
CETS01000780
292006
Gammaproteobacteria
TGC
Ala
>WENV170371888
CETS01047467
73827
Gammaproteobacteria
CAG
Leu
>WENV170372027
CETS01058826
178541
Gammaproteobacteria
CGG
Pro
>WENV170372073
CETS01062583
197498
Gammaproteobacteria
TGG
Pro
>WENV170371703
CETS01031489
118413
Gammaproteobacteria
TAG
Leu
>WENV170373524
CETS01295902
176065
Gammaproteobacteria
CCT
Arg
>WENV170371446
CETS01011384
232119
Gammaproteobacteria
ACG
Arg
>WENV170372538
CETS01108227
74048
Gammaproteobacteria
CAA
Leu
>WENV170372461
CETS01098880
306288
Gammaproteobacteria
GCC
Gly
>WENV170371802
CETS01040506
280699
Gammaproteobacteria
GGT
Thr
>WENV170371492
CETS01015618
242775
Gammaproteobacteria
TGG
Pro
>WENV170373496
CETS01294689
398943
Gammaproteobacteria
GAC
Val
>WENV170371945
CETS01051627
239021
Gammaproteobacteria
TCT
Arg
>WENV170372874
CETS01143210
63431
Gammaproteobacteria
GGA
Ser
>WENV170372382
CETS01090589
176301
Gammaproteobacteria
GAT
Ile
>WENV170371942
CETS01051463
176301
Gammaproteobacteria
GAT
Ile
>WENV170371294
CETS01000780
176301
Gammaproteobacteria
GAT
Ile
>WENV170373291
CETS01240150
400184
Gammaproteobacteria
>WENV170372572
CETS01112017
285547
Gammaproteobacteria
TTG
Gln
>WENV170371799
CETS01040506
280696
Gammaproteobacteria
TGT
Thr
>WENV170372134
CETS01067305
201377
Gammaproteobacteria
TGG
Pro
>WENV170373271
CETS01234323
176478
Gammaproteobacteria
CAT
Met
>WENV170371478
CETS01014361
186591
Gammaproteobacteria
ACG
Arg
>WENV170371479
CETS01014361
186591
Gammaproteobacteria
ACG
Arg
>WENV170373158
CETS01185237
184457
Gammaproteobacteria
GGG
Pro
>WENV170372896
CETS01145403
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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