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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170374949
CETT01145074
178510
Alphaproteobacteria
ACG
Arg
>WENV170373787
CETT01020981
424450
Alphaproteobacteria
GGT
Thr
>WENV170374814
CETT01131752
193463
Alphaproteobacteria
CCT
Arg
>WENV170374697
CETT01119006
201940
Alphaproteobacteria
CAT
Met
>WENV170375162
CETT01206402
481802
Alphaproteobacteria
TCC
Gly
>WENV170374259
CETT01066671
77412
Alphaproteobacteria
CAG
Leu
>WENV170374526
CETT01096613
100353
Alphaproteobacteria
GTA
Tyr
>WENV170375281
CETT01249014
178731
Alphaproteobacteria
GTC
Asp
>WENV170373703
CETT01012340
431636
Alphaproteobacteria
CTC
Glu
>WENV170374539
CETT01098234
121250
Alphaproteobacteria
TAG
Leu
>WENV170374901
CETT01139816
192131
Alphaproteobacteria
GTC
Asp
>WENV170374568
CETT01102085
435083
Alphaproteobacteria
>WENV170373863
CETT01027038
192275
Alphaproteobacteria
GTG
His
>WENV170375284
CETT01251158
400517
Alphaproteobacteria
GGT
Thr
>WENV170374457
CETT01089166
118213
Alphaproteobacteria
TAG
Leu
>WENV170374418
CETT01084492
145377
Alphaproteobacteria
>WENV170375196
CETT01219867
282981
Alphaproteobacteria
CCA
Trp
>WENV170374983
CETT01149276
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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