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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170381292
CETW01145830
281275
Gammaproteobacteria
TGT
Thr
>WENV170380767
CETW01077671
180053
Gammaproteobacteria
CAT
Met
>WENV170380953
CETW01103134
29834
Gammaproteobacteria
GCT
Ser
>WENV170381833
CETW01222988
399250
Gammaproteobacteria
TCC
Gly
>WENV170380230
CETW01016490
140925
Gammaproteobacteria
GTA
Tyr
>WENV170381385
CETW01158390
281282
Gammaproteobacteria
TTC
Glu
>WENV170380164
CETW01010935
13452
Gammaproteobacteria
GCT
Ser
>WENV170382076
CETW01353991
176663
Gammaproteobacteria
GGG
Pro
>WENV170380746
CETW01075050
178471
Gammaproteobacteria
GTT
Asn
>WENV170381249
CETW01140794
74339
Gammaproteobacteria
GAG
Leu
>WENV170381723
CETW01190983
351236
Gammaproteobacteria
TTT
Lys
>WENV170381628
CETW01184573
480516
Gammaproteobacteria
GCA
Cys
>WENV170381832
CETW01222988
126555
Gammaproteobacteria
GTA
Tyr
>WENV170381613
CETW01183760
243308
Gammaproteobacteria
TGG
Pro
>WENV170380166
CETW01010935
232119
Gammaproteobacteria
ACG
Arg
>WENV170380165
CETW01010935
232119
Gammaproteobacteria
ACG
Arg
>WENV170381296
CETW01146239
306288
Gammaproteobacteria
GCC
Gly
>WENV170380587
CETW01059744
242775
Gammaproteobacteria
TGG
Pro
>WENV170381075
CETW01116907
176664
Gammaproteobacteria
CCT
Arg
>WENV170380069
CETW01001601
334421
Gammaproteobacteria
TGT
Thr
>WENV170380352
CETW01032009
370389
Gammaproteobacteria
GGC
Ala
>WENV170380108
CETW01005274
176301
Gammaproteobacteria
GAT
Ile
>WENV170381425
CETW01162169
180678
Gammaproteobacteria
CCG
Arg
>WENV170381121
CETW01122379
176665
Gammaproteobacteria
CGG
Pro
>WENV170381141
CETW01124940
285547
Gammaproteobacteria
TTG
Gln
>WENV170381499
CETW01170350
23169
Gammaproteobacteria
GGA
Ser
>WENV170381172
CETW01129413
282018
Gammaproteobacteria
TGT
Thr
>WENV170381834
CETW01222988
296808
Gammaproteobacteria
GGT
Thr
>WENV170381615
CETW01183760
281283
Gammaproteobacteria
GTG
His
>WENV170381562
CETW01178717
176478
Gammaproteobacteria
CAT
Met
>WENV170380229
CETW01016490
282902
Gammaproteobacteria
TGT
Thr
>WENV170381261
CETW01142458
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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