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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170388643
CETZ01108591
331330
Gammaproteobacteria
TAC
Val
>WENV170389105
CETZ01234366
73123
Gammaproteobacteria
CAA
Leu
>WENV170387932
CETZ01026981
25129
Gammaproteobacteria
TGA
Ser
>WENV170388374
CETZ01077631
183804
Gammaproteobacteria
CAT
Met
>WENV170387899
CETZ01023514
297858
Gammaproteobacteria
TGC
Ala
>WENV170388304
CETZ01071152
297858
Gammaproteobacteria
TGC
Ala
>WENV170387684
CETZ01002448
178164
Gammaproteobacteria
GAT
Ile
>WENV170388330
CETZ01074402
20273
Gammaproteobacteria
TGA
Ser
>WENV170388964
CETZ01184118
176520
Gammaproteobacteria
CAT
Met
>WENV170388141
CETZ01050241
140925
Gammaproteobacteria
GTA
Tyr
>WENV170387729
CETZ01006363
74240
Gammaproteobacteria
CAA
Leu
>WENV170388138
CETZ01050044
190704
Gammaproteobacteria
GAT
Ile
>WENV170387707
CETZ01004428
74339
Gammaproteobacteria
GAG
Leu
>WENV170387907
CETZ01024872
480516
Gammaproteobacteria
GCA
Cys
>WENV170387976
CETZ01032497
181513
Gammaproteobacteria
TGG
Pro
>WENV170387785
CETZ01012094
242732
Gammaproteobacteria
ACG
Arg
>WENV170388768
CETZ01123122
184459
Gammaproteobacteria
CAT
Met
>WENV170388810
CETZ01125402
56694
Gammaproteobacteria
GGA
Ser
>WENV170387836
CETZ01017008
197498
Gammaproteobacteria
TGG
Pro
>WENV170387852
CETZ01018564
92638
Gammaproteobacteria
TAA
Leu
>WENV170388139
CETZ01050044
281436
Gammaproteobacteria
TGC
Ala
>WENV170389081
CETZ01226661
401684
Gammaproteobacteria
CCT
Arg
>WENV170387851
CETZ01018564
481678
Gammaproteobacteria
GCA
Cys
>WENV170387718
CETZ01005233
306288
Gammaproteobacteria
GCC
Gly
>WENV170387933
CETZ01026981
306288
Gammaproteobacteria
GCC
Gly
>WENV170388054
CETZ01041138
346373
Gammaproteobacteria
GAA
Phe
>WENV170388469
CETZ01089353
296672
Gammaproteobacteria
GGT
Thr
>WENV170389130
CETZ01245319
176665
Gammaproteobacteria
CGG
Pro
>WENV170388542
CETZ01097087
285547
Gammaproteobacteria
TTG
Gln
>WENV170387659
CETZ01000550
481314
Gammaproteobacteria
GCA
Cys
>WENV170388460
CETZ01088066
342077
Gammaproteobacteria
TAC
Val
>WENV170387855
CETZ01019004
180679
Gammaproteobacteria
CCA
Trp
>WENV170388392
CETZ01079680
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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