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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170391523
CEUA01233951
282894
Gammaproteobacteria
GAA
Phe
>WENV170389427
CEUA01013991
284706
Gammaproteobacteria
GTT
Asn
>WENV170391140
CEUA01205161
25129
Gammaproteobacteria
TGA
Ser
>WENV170389270
CEUA01000868
304066
Gammaproteobacteria
TTT
Lys
>WENV170391978
CEUA01454252
483085
Gammaproteobacteria
GCA
Cys
>WENV170390442
CEUA01111596
292006
Gammaproteobacteria
TGC
Ala
>WENV170391856
CEUA01405542
181513
Gammaproteobacteria
TGG
Pro
>WENV170391631
CEUA01270367
56694
Gammaproteobacteria
GGA
Ser
>WENV170391046
CEUA01193677
178169
Gammaproteobacteria
GAC
Val
>WENV170391029
CEUA01191975
306288
Gammaproteobacteria
GCC
Gly
>WENV170390564
CEUA01125851
177028
Gammaproteobacteria
CAT
Met
>WENV170390121
CEUA01076880
176544
Gammaproteobacteria
CAT
Met
>WENV170390462
CEUA01113914
176301
Gammaproteobacteria
GAT
Ile
>WENV170390441
CEUA01111596
176301
Gammaproteobacteria
GAT
Ile
>WENV170389956
CEUA01057321
176301
Gammaproteobacteria
GAT
Ile
>WENV170389914
CEUA01053843
176301
Gammaproteobacteria
GAT
Ile
>WENV170390123
CEUA01076880
180681
Gammaproteobacteria
TGG
Pro
>WENV170390122
CEUA01076880
118640
Gammaproteobacteria
TAG
Leu
>WENV170390616
CEUA01133054
141076
Gammaproteobacteria
GTA
Tyr
>WENV170390395
CEUA01106311
186591
Gammaproteobacteria
ACG
Arg
>WENV170391143
CEUA01205255
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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