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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170395784
CEUC01140776
297858
Gammaproteobacteria
TGC
Ala
>WENV170395435
CEUC01111727
311084
Gammaproteobacteria
GCC
Gly
>WENV170393950
CEUC01000588
299227
Gammaproteobacteria
GTT
Asn
>WENV170395436
CEUC01111727
480629
Gammaproteobacteria
GCA
Cys
>WENV170395762
CEUC01139080
56694
Gammaproteobacteria
GGA
Ser
>WENV170396671
CEUC01328942
118413
Gammaproteobacteria
TAG
Leu
>WENV170396492
CEUC01299280
312181
Gammaproteobacteria
TTT
Lys
>WENV170394081
CEUC01007617
232119
Gammaproteobacteria
ACG
Arg
>WENV170396637
CEUC01325850
182374
Gammaproteobacteria
CAT
Met
>WENV170395543
CEUC01121223
180680
Gammaproteobacteria
GAC
Val
>WENV170394663
CEUC01046632
176301
Gammaproteobacteria
GAT
Ile
>WENV170393983
CEUC01002200
180678
Gammaproteobacteria
CCG
Arg
>WENV170395206
CEUC01090667
481314
Gammaproteobacteria
GCA
Cys
>WENV170394893
CEUC01065292
201377
Gammaproteobacteria
TGG
Pro
>WENV170394329
CEUC01024104
201377
Gammaproteobacteria
TGG
Pro
>WENV170394208
CEUC01015656
286980
Gammaproteobacteria
TTT
Lys
>WENV170394875
CEUC01063428
186591
Gammaproteobacteria
ACG
Arg
>WENV170395985
CEUC01150328
180679
Gammaproteobacteria
CCA
Trp
>WENV170395738
CEUC01137268
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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