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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170397965
CEUD01112056
73523
Alphaproteobacteria
CAG
Leu
>WENV170397015
CEUD01017242
201940
Alphaproteobacteria
CAT
Met
>WENV170397545
CEUD01070567
201940
Alphaproteobacteria
CAT
Met
>WENV170397554
CEUD01072126
178733
Alphaproteobacteria
CAT
Met
>WENV170398875
CEUD01319654
404712
Alphaproteobacteria
CCC
Gly
>WENV170398005
CEUD01115038
193463
Alphaproteobacteria
CCT
Arg
>WENV170397807
CEUD01099215
29739
Alphaproteobacteria
CGA
Ser
>WENV170397412
CEUD01057263
296698
Alphaproteobacteria
CGC
Ala
>WENV170397120
CEUD01027411
284796
Alphaproteobacteria
CGT
Thr
>WENV170398657
CEUD01282275
400518
Alphaproteobacteria
GAA
Phe
>WENV170397999
CEUD01114494
480900
Alphaproteobacteria
GCA
Cys
>WENV170397743
CEUD01090134
427571
Alphaproteobacteria
GCC
Gly
>WENV170398086
CEUD01120771
21542
Alphaproteobacteria
GGA
Ser
>WENV170398015
CEUD01116118
183632
Alphaproteobacteria
GGG
Pro
>WENV170399039
CEUD01335403
102146
Alphaproteobacteria
GTA
Tyr
>WENV170398103
CEUD01121814
282745
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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