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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170400429
CEUE01107794
297858
Gammaproteobacteria
TGC
Ala
>WENV170399289
CEUE01006529
480941
Gammaproteobacteria
TCC
Gly
>WENV170399697
CEUE01036912
480941
Gammaproteobacteria
TCC
Gly
>WENV170402142
CEUE01299415
214256
Gammaproteobacteria
GGG
Pro
>WENV170401786
CEUE01273789
299414
Gammaproteobacteria
TTT
Lys
>WENV170401191
CEUE01198098
314350
Gammaproteobacteria
CCA
Trp
>WENV170401945
CEUE01288180
314350
Gammaproteobacteria
CCA
Trp
>WENV170401519
CEUE01243479
176796
Gammaproteobacteria
GGG
Pro
>WENV170401737
CEUE01268415
287037
Gammaproteobacteria
GTG
His
>WENV170401026
CEUE01177080
480653
Gammaproteobacteria
GCA
Cys
>WENV170401269
CEUE01209527
287057
Gammaproteobacteria
GAA
Phe
>WENV170400299
CEUE01092961
198810
Gammaproteobacteria
GAT
Ile
>WENV170399419
CEUE01015088
292006
Gammaproteobacteria
TGC
Ala
>WENV170399918
CEUE01057062
178168
Gammaproteobacteria
ACG
Arg
>WENV170399569
CEUE01026769
350703
Gammaproteobacteria
TTT
Lys
>WENV170401653
CEUE01260605
243308
Gammaproteobacteria
TGG
Pro
>WENV170401743
CEUE01269058
508107
Gammaproteobacteria
GCA
Cys
>WENV170401746
CEUE01269601
179888
Gammaproteobacteria
ACG
Arg
>WENV170402158
CEUE01299735
306288
Gammaproteobacteria
GCC
Gly
>WENV170401268
CEUE01209480
334421
Gammaproteobacteria
TGT
Thr
>WENV170402067
CEUE01295765
177028
Gammaproteobacteria
CAT
Met
>WENV170401138
CEUE01190968
488965
Gammaproteobacteria
GCA
Cys
>WENV170400777
CEUE01148122
176301
Gammaproteobacteria
GAT
Ile
>WENV170399418
CEUE01015088
176301
Gammaproteobacteria
GAT
Ile
>WENV170402028
CEUE01292524
283964
Gammaproteobacteria
TTT
Lys
>WENV170402352
CEUE01399247
285547
Gammaproteobacteria
TTG
Gln
>WENV170401656
CEUE01260871
179710
Gammaproteobacteria
GAC
Val
>WENV170400667
CEUE01136621
186591
Gammaproteobacteria
ACG
Arg
>WENV170400890
CEUE01159979
186591
Gammaproteobacteria
ACG
Arg
>WENV170400739
CEUE01143982
282902
Gammaproteobacteria
TGT
Thr
>WENV170400277
CEUE01090781
282902
Gammaproteobacteria
TGT
Thr
>WENV170399695
CEUE01036912
282902
Gammaproteobacteria
TGT
Thr
>WENV170402508
CEUE01478798
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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