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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170404411
CEUG01001168
140963
Alphaproteobacteria
>WENV170404877
CEUG01041174
201940
Alphaproteobacteria
CAT
Met
>WENV170405339
CEUG01090797
201940
Alphaproteobacteria
CAT
Met
>WENV170405803
CEUG01190476
290043
Alphaproteobacteria
TGC
Ala
>WENV170405314
CEUG01089018
193088
Alphaproteobacteria
GAT
Ile
>WENV170404991
CEUG01051658
183628
Alphaproteobacteria
CCG
Arg
>WENV170405851
CEUG01210554
33571
Alphaproteobacteria
TGA
Ser
>WENV170405170
CEUG01071126
400544
Alphaproteobacteria
GGT
Thr
>WENV170405825
CEUG01199566
282843
Alphaproteobacteria
TAC
Val
>WENV170405880
CEUG01218397
338616
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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