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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170411135
CEUJ01164432
424450
Alphaproteobacteria
GGT
Thr
>WENV170409291
CEUJ01016430
140876
Alphaproteobacteria
>WENV170409739
CEUJ01046169
201940
Alphaproteobacteria
CAT
Met
>WENV170410799
CEUJ01135892
201940
Alphaproteobacteria
CAT
Met
>WENV170410906
CEUJ01145616
201940
Alphaproteobacteria
CAT
Met
>WENV170409413
CEUJ01024011
197241
Alphaproteobacteria
GGG
Pro
>WENV170410227
CEUJ01082265
197241
Alphaproteobacteria
GGG
Pro
>WENV170409481
CEUJ01030245
481268
Alphaproteobacteria
TCC
Gly
>WENV170409402
CEUJ01023014
435083
Alphaproteobacteria
>WENV170410806
CEUJ01136419
212319
Alphaproteobacteria
GTG
His
>WENV170411047
CEUJ01157767
398994
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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